Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

by Eduardo N. Taboada, Eduardo N. Taboada, Morag R. Graham, Morag R. Graham, João A. Carriço, Gary Van Domselaar, Gary Van Domselaar
Published 2017-05-01

Erratum: Inglis, G.D., et al. Tetracycline Resistant <em>Campylobacter jejuni</em> Subtypes Emanating from Beef Cattle Administered Non-Therapeutic Chlortetracycline Are Longitudin...

by G. Douglas Inglis, Jenny F. Gusse, Kathaleen E. House, Tara G. Shelton, Eduardo N. Taboada
Published 2020-02-01

Detection of genetic diversity in Campylobacter jejuni isolated from a commercial turkey flock using flaA typing, MLST analysis and microarray assay.

by Hosny El-Adawy, Helmut Hotzel, Herbert Tomaso, Heinrich Neubauer, Eduardo N Taboada, Ralf Ehricht, Hafez M Hafez
Published 2013-01-01

A framework for assessing the concordance of molecular typing methods and the true strain phylogeny of Campylobacter jejuni and C. coli using draft genome sequence data

by Catherine Dianna Carrillo, Peter eKruczkiewicz, Steven eMutschall, Andrei eTudor, Clifford eClark, Eduardo N Taboada
Published 2012-05-01

Source attribution of human campylobacteriosis at the point of exposure by combining comparative exposure assessment and subtype comparison based on comparative genomic fingerprint...

by André Ravel, Matt Hurst, Nicoleta Petrica, Julie David, Steven K Mutschall, Katarina Pintar, Eduardo N Taboada, Frank Pollari
Published 2017-01-01

Comparative variation within the genome of Campylobacter jejuni NCTC 11168 in human and murine hosts.

by Dallas K Thomas, Abdul G Lone, L Brent Selinger, Eduardo N Taboada, Richard R E Uwiera, D Wade Abbott, G Douglas Inglis
Published 2014-01-01

Frequent Implication of Multistress-Tolerant Campylobacter jejuni in Human Infections

by Euna Oh, Linda Chui, Junghee Bae, Vincent Li, Angela Ma, Steven K. Mutschall, Eduardo N. Taboada, Lynn M. McMullen, Byeonghwa Jeon
Published 2018-06-01

The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies.

by Catherine E Yoshida, Peter Kruczkiewicz, Chad R Laing, Erika J Lingohr, Victor P J Gannon, John H E Nash, Eduardo N Taboada
Published 2016-01-01

Campylobacter jejuni Strain Dynamics in a Raccoon (Procyon lotor) Population in Southern Ontario, Canada: High Prevalence and Rapid Subtype Turnover

by Steven K. Mutschall, Benjamin M. Hetman, Kristin J. Bondo, Victor P. J. Gannon, Claire M. Jardine, Claire M. Jardine, Eduardo N. Taboada
Published 2020-02-01

A strain comparison of Campylobacter isolated from retail poultry and human clinical cases in Atlantic Canada.

by Lisa M Hodges, Catherine D Carrillo, Jacqueline P Upham, Antonela Borza, Mikaela Eisebraun, Robyn Kenwell, Steven K Mutschall, David Haldane, Emily Schleihauf, Eduardo N Taboada
Published 2019-01-01

“These Aren’t the Strains You’re Looking for”: Recovery Bias of Common Campylobacter jejuni Subtypes in Mixed Cultures

by Benjamin M. Hetman, Benjamin M. Hetman, Steven K. Mutschall, Catherine D. Carrillo, James E. Thomas, Victor P. J. Gannon, G. Douglas Inglis, Eduardo N. Taboada
Published 2020-04-01

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

by Chris A. Yachison, Chris A. Yachison, Catherine Yoshida, James Robertson, John H. E. Nash, Peter Kruczkiewicz, Eduardo N. Taboada, Matthew Walker, Aleisha Reimer, Sara Christianson, Anil Nichani, The PulseNet Canada Steering Committee, Celine Nadon, Celine Nadon
Published 2017-06-01

Integrating Whole-Genome Sequencing Data Into Quantitative Risk Assessment of Foodborne Antimicrobial Resistance: A Review of Opportunities and Challenges

by Lucie Collineau, Patrick Boerlin, Carolee A. Carson, Brennan Chapman, Brennan Chapman, Aamir Fazil, Benjamin Hetman, Benjamin Hetman, Scott A. McEwen, E. Jane Parmley, Richard J. Reid-Smith, Richard J. Reid-Smith, Eduardo N. Taboada, Ben A. Smith
Published 2019-05-01

A Genome-Wide Association Study to Identify Diagnostic Markers for Human Pathogenic Campylobacter jejuni Strains

by Cody J. Buchanan, Cody J. Buchanan, Andrew L. Webb, Steven K. Mutschall, Peter Kruczkiewicz, Dillon O. R. Barker, Dillon O. R. Barker, Benjamin M. Hetman, Victor P. J. Gannon, D. Wade Abbott, James E. Thomas, G. Douglas Inglis, Eduardo N. Taboada
Published 2017-06-01