Enriching Human Interactome with Functional Mutations to Detect High-Impact Network Modules Underlying Complex Diseases

by Hongzhu Cui, Suhas Srinivasan, Dmitry Korkin
Published 2019-11-01

Extreme evolutionary conservation of functionally important regions in H1N1 influenza proteome.

by Samantha Warren, Xiu-Feng Wan, Gavin Conant, Dmitry Korkin
Published 2013-01-01

Structural similarity and classification of protein interaction interfaces.

by Nan Zhao, Bin Pang, Chi-Ren Shyu, Dmitry Korkin
Published 2011-01-01

Determining effects of non-synonymous SNPs on protein-protein interactions using supervised and semi-supervised learning.

by Nan Zhao, Jing Ginger Han, Chi-Ren Shyu, Dmitry Korkin
Published 2014-05-01

Evidence of positive selection in mitochondrial complexes I and V of the African elephant.

by Tabitha M Finch, Nan Zhao, Dmitry Korkin, Katy H Frederick, Lori S Eggert
Published 2014-01-01

Controlled modification of biomolecules by ultrashort laser pulses in polar liquids

by Vitaly Gruzdev, Dmitry Korkin, Brian P. Mooney, Jesper F. Havelund, Ian Max Møller, Jay J. Thelen
Published 2017-07-01

Structural Genomics of SARS-CoV-2 Indicates Evolutionary Conserved Functional Regions of Viral Proteins

by Suhas Srinivasan, Hongzhu Cui, Ziyang Gao, Ming Liu, Senbao Lu, Winnie Mkandawire, Oleksandr Narykov, Mo Sun, Dmitry Korkin
Published 2020-03-01

Structural modeling of protein interactions by analogy: application to PSD-95.

by Dmitry Korkin, Fred P Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B Kennedy, Andrej Sali
Published 2006-11-01

Histological quantitation of brain injury using whole slide imaging: a pilot validation study in mice.

by Zhenzhou Chen, Dmitriy Shin, Shanyan Chen, Kovalenko Mikhail, Orr Hadass, Brittany N Tomlison, Dmitry Korkin, Chi-Ren Shyu, Jiankun Cui, Douglas C Anthony, Zezong Gu
Published 2014-01-01

The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes

by Rick Masonbrink, Tom R. Maier, Usha Muppirala, Arun S. Seetharam, Etienne Lord, Parijat S. Juvale, Jeremy Schmutz, Nathan T. Johnson, Dmitry Korkin, Melissa G. Mitchum, Benjamin Mimee, Sebastian Eves-van den Akker, Matthew Hudson, Andrew J. Severin, Thomas J. Baum
Published 2019-02-01

In Silico Edgetic Profiling and Network Analysis of Human Genetic Variants, with an Application to Disease Module Detection

by Cui, Hongzhu
Published 2020

Boosting Gene Expression Clustering with System-Wide Biological Information and Deep Learning

by Cui, Hongzhu
Published 2019

Gene fusions in cancer: Classification of fusion events and regulation patterns of fusion pathway neighbors

by Hughes, Katelyn
Published 2016