A Tool for Visualization and Analysis of Single-Cell RNA-Seq Data Based on Text Mining

by Gennaro Gambardella, Gennaro Gambardella, Diego di Bernardo, Diego di Bernardo
Published 2019-08-01

A parallel implementation of the network identification by multiple regression (NIR) algorithm to reverse-engineer regulatory gene networks.

by Francesco Gregoretti, Vincenzo Belcastro, Diego di Bernardo, Gennaro Oliva
Published 2010-04-01

Quantitative Characterization of α-Synuclein Aggregation in Living Cells through Automated Microfluidics Feedback Control

by Giansimone Perrino, Cathal Wilson, Marco Santorelli, Diego di Bernardo
Published 2019-04-01

Colocalization of coregulated genes: a steered molecular dynamics study of human chromosome 19.

by Marco Di Stefano, Angelo Rosa, Vincenzo Belcastro, Diego di Bernardo, Cristian Micheletti
Published 2013-01-01

The impact of microRNAs on transcriptional heterogeneity and gene co-expression across single embryonic stem cells

by Gennaro Gambardella, Annamaria Carissimo, Amy Chen, Luisa Cutillo, Tomasz J. Nowakowski, Diego di Bernardo, Robert Blelloch
Published 2017-01-01

Construction and modelling of an inducible positive feedback loop stably integrated in a mammalian cell-line.

by Velia Siciliano, Filippo Menolascina, Lucia Marucci, Chiara Fracassi, Immacolata Garzilli, Maria Nicoletta Moretti, Diego di Bernardo
Published 2011-06-01

In-vivo real-time control of protein expression from endogenous and synthetic gene networks.

by Filippo Menolascina, Gianfranco Fiore, Emanuele Orabona, Luca De Stefano, Mike Ferry, Jeff Hasty, Mario di Bernardo, Diego di Bernardo
Published 2014-05-01

Automatic synchronisation of the cell cycle in budding yeast through closed-loop feedback control

by Giansimone Perrino, Sara Napolitano, Francesca Galdi, Antonella La Regina, Davide Fiore, Teresa Giuliano, Mario di Bernardo, Diego di Bernardo
Published 2021-04-01

In Silico Modeling of Liver Metabolism in a Human Disease Reveals a Key Enzyme for Histidine and Histamine Homeostasis

by Roberto Pagliarini, Raffaele Castello, Francesco Napolitano, Roberta Borzone, Patrizia Annunziata, Giorgia Mandrile, Mario De Marchi, Nicola Brunetti-Pierri, Diego di Bernardo
Published 2016-06-01

A tunable dual-input system for on-demand dynamic gene expression regulation

by Elisa Pedone, Lorena Postiglione, Francesco Aulicino, Dan L. Rocca, Sandra Montes-Olivas, Mahmoud Khazim, Diego di Bernardo, Maria Pia Cosma, Lucia Marucci
Published 2019-10-01

How to turn a genetic circuit into a synthetic tunable oscillator, or a bistable switch.

by Lucia Marucci, David A W Barton, Irene Cantone, Maria Aurelia Ricci, Maria Pia Cosma, Stefania Santini, Diego di Bernardo, Mario di Bernardo
Published 2009-12-01

Intrinsic Abnormalities of Cystic Fibrosis Airway Connective Tissue Revealed by an In Vitro 3D Stromal Model

by Claudia Mazio, Laura S. Scognamiglio, Rossella De Cegli, Luis J.V. Galietta, Diego Di Bernardo, Costantino Casale, Francesco Urciuolo, Giorgia Imparato, Paolo A. Netti
Published 2020-06-01

Comprehensive kinome NGS targeted expression profiling by KING-REX

by Giovanni Carapezza, Carlo Cusi, Ettore Rizzo, Laura Raddrizzani, Sebastiano Di Bella, Alessio Somaschini, Antonella Leone, Rosita Lupi, Margherita Mutarelli, Vincenzo Nigro, Diego di Bernardo, Paolo Magni, Antonella Isacchi, Roberta Bosotti
Published 2019-04-01

Unravelling druggable signalling networks that control F508del-CFTR proteostasis

by Ramanath Narayana Hegde, Seetharaman Parashuraman, Francesco Iorio, Fabiana Ciciriello, Fabrizio Capuani, Annamaria Carissimo, Diego Carrella, Vincenzo Belcastro, Advait Subramanian, Laura Bounti, Maria Persico, Graeme Carlile, Luis Galietta, David Y Thomas, Diego Di Bernardo, Alberto Luini
Published 2015-12-01

The Autophagy Inhibitor Spautin-1 Antagonizes Rescue of Mutant CFTR Through an Autophagy-Independent and USP13-Mediated Mechanism

by Emanuela Pesce, Elvira Sondo, Loretta Ferrera, Valeria Tomati, Emanuela Caci, Paolo Scudieri, Ilaria Musante, Mario Renda, Nesrine Baatallah, Nesrine Baatallah, Nathalie Servel, Nathalie Servel, Alexandre Hinzpeter, Alexandre Hinzpeter, Diego di Bernardo, Nicoletta Pedemonte, Luis J. V. Galietta
Published 2018-12-01

Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency

by Alessandro Luciani, Anke Schumann, Marine Berquez, Zhiyong Chen, Daniela Nieri, Mario Failli, Huguette Debaix, Beatrice Paola Festa, Natsuko Tokonami, Andrea Raimondi, Alessio Cremonesi, Diego Carrella, Patrick Forny, Stefan Kölker, Francesca Diomedi Camassei, Francisca Diaz, Carlos T. Moraes, Diego Di Bernardo, Matthias R. Baumgartner, Olivier Devuyst
Published 2020-02-01

Author Correction: Impaired mitophagy links mitochondrial disease to epithelial stress in methylmalonyl-CoA mutase deficiency

by Alessandro Luciani, Anke Schumann, Marine Berquez, Zhiyong Chen, Daniela Nieri, Mario Failli, Huguette Debaix, Beatrice Paola Festa, Natsuko Tokonami, Andrea Raimondi, Alessio Cremonesi, Diego Carrella, Patrick Forny, Stefan Kölker, Francesca Diomedi Camassei, Francisca Diaz, Carlos T. Moraes, Diego Di Bernardo, Matthias R. Baumgartner, Olivier Devuyst
Published 2020-04-01