Hodgkin–Huxley revisited: reparametrization and identifiability analysis of the classic action potential model with approximate Bayesian methods

by Aidan C. Daly, David J. Gavaghan, Chris Holmes, Jonathan Cooper
Published 2015-01-01

Hierarchical Bayesian inference for ion channel screening dose-response data [version 2; referees: 2 approved]

by Ross H Johnstone, Rémi Bardenet, David J Gavaghan, Gary R Mirams
Published 2017-03-01

The free energy landscape of dimerization of a membrane protein, NanC.

by Thomas A Dunton, Joseph E Goose, David J Gavaghan, Mark S P Sansom, James M Osborne
Published 2014-01-01

Comparing individual-based approaches to modelling the self-organization of multicellular tissues.

by James M Osborne, Alexander G Fletcher, Joe M Pitt-Francis, Philip K Maini, David J Gavaghan
Published 2017-02-01

A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath.

by Sara-Jane Dunn, Paul L Appleton, Scott A Nelson, Inke S Näthke, David J Gavaghan, James M Osborne
Published 2012-01-01

Probabilistic Inference on Noisy Time Series (PINTS)

by Michael Clerx, Martin Robinson, Ben Lambert, Chon Lok Lei, Sanmitra Ghosh, Gary R. Mirams, David J. Gavaghan
Published 2019-07-01

A Voltammetric Perspective of Multi-Electron and Proton Transfer in Protein Redox Chemistry: Insights From Computational Analysis of Escherichia coli HypD Fourier Transformed Alter...

by Alister R. Dale-Evans, Martin J. Robinson, Henry O. Lloyd-Laney, David J. Gavaghan, Alan M. Bond, Alison Parkin
Published 2021-06-01

The role of the Hes1 crosstalk hub in Notch-Wnt interactions of the intestinal crypt.

by Sophie K Kay, Heather A Harrington, Sarah Shepherd, Keith Brennan, Trevor Dale, James M Osborne, David J Gavaghan, Helen M Byrne
Published 2017-02-01

Tailoring Mathematical Models to Stem-Cell Derived Cardiomyocyte Lines Can Improve Predictions of Drug-Induced Changes to Their Electrophysiology

by Chon Lok Lei, Ken Wang, Michael Clerx, Ross H. Johnstone, Maria P. Hortigon-Vinagre, Victor Zamora, Andrew Allan, Godfrey L. Smith, David J. Gavaghan, Gary R. Mirams, Liudmila Polonchuk
Published 2017-12-01

Ten simple rules for surviving an interdisciplinary PhD.

by Samuel Demharter, Nicholas Pearce, Kylie Beattie, Isabel Frost, Jinwoo Leem, Alistair Martin, Robert Oppenheimer, Cristian Regep, Tammo Rukat, Alexander Skates, Nicola Trendel, David J Gavaghan, Charlotte M Deane, Bernhard Knapp
Published 2017-05-01

Chaste: an open source C++ library for computational physiology and biology.

by Gary R Mirams, Christopher J Arthurs, Miguel O Bernabeu, Rafel Bordas, Jonathan Cooper, Alberto Corrias, Yohan Davit, Sara-Jane Dunn, Alexander G Fletcher, Daniel G Harvey, Megan E Marsh, James M Osborne, Pras Pathmanathan, Joe Pitt-Francis, James Southern, Nejib Zemzemi, David J Gavaghan
Published 2013-01-01

Ten simple rules for effective computational research.

by James M Osborne, Miguel O Bernabeu, Maria Bruna, Ben Calderhead, Jonathan Cooper, Neil Dalchau, Sara-Jane Dunn, Alexander G Fletcher, Robin Freeman, Derek Groen, Bernhard Knapp, Greg J McInerny, Gary R Mirams, Joe Pitt-Francis, Biswa Sengupta, David W Wright, Christian A Yates, David J Gavaghan, Stephen Emmott, Charlotte Deane
Published 2014-03-01