A Suite of Therapeutically-Inspired Nucleic Acid Logic Systems for Conditional Generation of Single-Stranded and Double-Stranded Oligonucleotides

by Paul Zakrevsky, Eckart Bindewald, Hadley Humbertson, Mathias Viard, Nomongo Dorjsuren, Bruce A. Shapiro
Published 2019-04-01

RNA–Protein Interactions Prevent Long RNA Duplex Formation: Implications for the Design of RNA-Based Therapeutics

by Eckart Bindewald, Lisheng Dai, Wojciech K. Kasprzak, Taejin Kim, Shuo Gu, Bruce A. Shapiro
Published 2018-12-01

Predicting Consensus Structures for RNA Alignments Via Pseudo-Energy Minimization

by Junilda Spirollari, Jason T.L. Wang, Kaizhong Zhang, Vivian Bellofatto, Yongkyu Park, Bruce A. Shapiro
Published 2009-01-01

Predicting Consensus Structures for RNA Alignments via Pseudo-Energy Minimization

by Junilda Spirollari, Jason T.L. Wang, Kaizhong Zhang, Vivian Bellofatto, Yongkyu Park, Bruce A. Shapiro
Published 2009-01-01

Correction: Role of 3′UTRs in the Translation of mRNAs Regulated by Oncogenic eIF4E—A Computational Inference

by Arti N. Santhanam, Eckart Bindewald, Vinagolu K. Rajasekhar, Ola Larsson, Nahum Sonenberg, Nancy H. Colburn, Bruce A. Shapiro
Published 2009-01-01

Correction: Role of 3′UTRs in the Translation of mRNAs Regulated by Oncogenic eIF4E—A Computational Inference.

by Arti N. Santhanam, Eckart Bindewald, Vinagolu K. Rajasekhar, Ola Larsson, Nahum Sonenberg, Nancy H. Colburn, Bruce A. Shapiro
Published 2009-01-01

Role of 3'UTRs in the translation of mRNAs regulated by oncogenic eIF4E--a computational inference.

by Arti N Santhanam, Eckart Bindewald, Vinagolu K Rajasekhar, Ola Larsson, Nahum Sonenberg, Nancy H Colburn, Bruce A Shapiro
Published 2009-01-01

Folding behavior of a T-shaped, ribosome-binding translation enhancer implicated in a wide-spread conformational switch

by My-Tra Le, Wojciech K Kasprzak, Taejin Kim, Feng Gao, Megan YL Young, Xuefeng Yuan, Bruce A Shapiro, Joonil Seog, Anne E Simon
Published 2017-02-01

Characterization of Cationic Bolaamphiphile Vesicles for siRNA Delivery into Tumors and Brain

by Taejin Kim, Mathias Viard, Kirill A. Afonin, Kshitij Gupta, Mary Popov, Jacqueline Salotti, Peter F. Johnson, Charles Linder, Eliahu Heldman, Bruce A. Shapiro
Published 2020-06-01

In Silico, In Vitro, and In Vivo Studies Indicate the Potential Use of Bolaamphiphiles for Therapeutic siRNAs Delivery

by Taejin Kim, Kirill A. Afonin, Mathias Viard, Alexey Y Koyfman, Selene Sparks, Eliahu Heldman, Sarina Grinberg, Charles Linder, Robert P Blumenthal, Bruce A Shapiro
Published 2013-01-01

An intergenic non-coding rRNA correlated with expression of the rRNA and frequency of an rRNA single nucleotide polymorphism in lung cancer cells.

by Yih-Horng Shiao, Sorin T Lupascu, Yuhan D Gu, Wojciech Kasprzak, Christopher J Hwang, Janet R Fields, Robert M Leighty, Octavio Quiñones, Bruce A Shapiro, W Gregory Alvord, Lucy M Anderson
Published 2009-10-01

Structural Differences between Pri-miRNA Paralogs Promote Alternative Drosha Cleavage and Expand Target Repertoires

by Xavier Bofill-De Ros, Wojciech K. Kasprzak, Yuba Bhandari, Lixin Fan, Quinn Cavanaugh, Minjie Jiang, Lisheng Dai, Acong Yang, Tie-Juan Shao, Bruce A. Shapiro, Yun-Xing Wang, Shuo Gu
Published 2019-01-01

Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells.

by Saleh Tamim, Dat T Vo, Philip J Uren, Mei Qiao, Eckart Bindewald, Wojciech K Kasprzak, Bruce A Shapiro, Helder I Nakaya, Suzanne C Burns, Patricia R Araujo, Ichiro Nakano, Agnes J Radek, Scott Kuersten, Andrew D Smith, Luiz O F Penalva
Published 2014-01-01