An optimized, amplicon-based approach for sequencing of SARS-CoV-2 from patient samples using COVIDSeq assay on Illumina MiSeq sequencing platforms

by Rahul C. Bhoyar, Vigneshwar Senthivel, Bani Jolly, Mohamed Imran, Abhinav Jain, Mohit Kumar Divakar, Vinod Scaria, Sridhar Sivasubbu
Published 2021-09-01

Analysis of the potential impact of genomic variants in global SARS-CoV-2 genomes on molecular diagnostic assays

by Abhinav Jain, Mercy Rophina, Saurabh Mahajan, Bhavya Balaji Krishnan, Manasa Sharma, Sreya Mandal, Teresa Fernandez, Sumayra Sultanji, Bani Jolly, Samatha Mathew, Sridhar Sivasubbu, Vinod Scaria
Published 2021-01-01

Asymptomatic reactivation of SARS-CoV-2 in a child with neuroblastoma characterised by whole genome sequencing

by Satya Prakash Yadav, Dhwanee Thakkar, Rahul C. Bhoyar, Abhinav Jain, Teena Wadhwa, Mohamed Imran, Bani Jolly, Mohit Kumar Divakar, Rohit Kapoor, Neha Rastogi, Disha Sharma, Paras Sehgal, Gyan Ranjan, Sridhar Sivasubbu, Smita Sarma, Vinod Scaria
Published 2021-01-01

Initial Insights Into the Genetic Epidemiology of SARS-CoV-2 Isolates From Kerala Suggest Local Spread From Limited Introductions

by Chandni Radhakrishnan, Mohit Kumar Divakar, Mohit Kumar Divakar, Abhinav Jain, Abhinav Jain, Prasanth Viswanathan, Rahul C. Bhoyar, Bani Jolly, Bani Jolly, Mohamed Imran, Mohamed Imran, Disha Sharma, Mercy Rophina, Mercy Rophina, Gyan Ranjan, Gyan Ranjan, Paras Sehgal, Paras Sehgal, Beena Philomina Jose, Rajendran Vadukkoot Raman, Thulaseedharan Nallaveettil Kesavan, Kalpana George, Sheela Mathew, Jayesh Kumar Poovullathil, Sajeeth Kumar Keeriyatt Govindan, Priyanka Raveendranadhan Nair, Shameer Vadekkandiyil, Vineeth Gladson, Midhun Mohan, Fairoz Cheriyalingal Parambath, Mohit Mangla, Mohit Mangla, Afra Shamnath, Indian CoV2 Genomics & Genetic Epidemiology (IndiCovGEN) Consortium, Sridhar Sivasubbu, Sridhar Sivasubbu, Vinod Scaria, Vinod Scaria
Published 2021-03-01

High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next-generation sequencing.

by Rahul C Bhoyar, Abhinav Jain, Paras Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, Sudhir Bhandari, Sandeep K Mathur, Anshul Kumar, Rahul Sahlot, Pallavali Rojarani, Juturu Vijaya Lakshmi, Avileli Surekha, Pulala Chandra Sekhar, Shelly Mahajan, Shet Masih, Pawan Singh, Vipin Kumar, Blessy Jose, Vidur Mahajan, Vivek Gupta, Rakesh Gupta, Prabhakar Arumugam, Anjali Singh, Ananya Nandy, Ragavendran P V, Rakesh Mohan Jha, Anupama Kumari, Sheetal Gandotra, Vivek Rao, Mohammed Faruq, Sanjeev Kumar, Betsy Reshma G, Narendra Varma G, Shuvra Shekhar Roy, Antara Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, Mukta Poojary, Vinod Scaria, Sridhar Sivasubbu
Published 2021-01-01