Automated detection of synapses in serial section transmission electron microscopy image stacks.

by Anna Kreshuk, Ullrich Koethe, Elizabeth Pax, Davi D Bock, Fred A Hamprecht
Published 2014-01-01

Developing open-source software for bioimage analysis: opportunities and challenges [version 1; peer review: 2 approved]

by Florian Levet, Anne E. Carpenter, Kevin W. Eliceiri, Anna Kreshuk, Peter Bankhead, Robert Haase
Published 2021-04-01

Automated detection and segmentation of synaptic contacts in nearly isotropic serial electron microscopy images.

by Anna Kreshuk, Christoph N Straehle, Christoph Sommer, Ullrich Koethe, Marco Cantoni, Graham Knott, Fred A Hamprecht
Published 2011-01-01

Correlative in vivo 2 photon and focused ion beam scanning electron microscopy of cortical neurons.

by Bohumil Maco, Anthony Holtmaat, Marco Cantoni, Anna Kreshuk, Christoph N Straehle, Fred A Hamprecht, Graham W Knott
Published 2013-01-01

A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule

by Athul Vijayan, Rachele Tofanelli, Sören Strauss, Lorenzo Cerrone, Adrian Wolny, Joanna Strohmeier, Anna Kreshuk, Fred A Hamprecht, Richard S Smith, Kay Schneitz
Published 2021-01-01

QUINT: Workflow for Quantification and Spatial Analysis of Features in Histological Images From Rodent Brain

by Sharon C. Yates, Nicolaas E. Groeneboom, Christopher Coello, Stefan F. Lichtenthaler, Stefan F. Lichtenthaler, Stefan F. Lichtenthaler, Peer-Hendrik Kuhn, Hans-Ulrich Demuth, Maike Hartlage-Rübsamen, Steffen Roßner, Trygve Leergaard, Anna Kreshuk, Maja A. Puchades, Jan G. Bjaalie
Published 2019-12-01

Accurate and versatile 3D segmentation of plant tissues at cellular resolution

by Adrian Wolny, Lorenzo Cerrone, Athul Vijayan, Rachele Tofanelli, Amaya Vilches Barro, Marion Louveaux, Christian Wenzl, Sören Strauss, David Wilson-Sánchez, Rena Lymbouridou, Susanne S Steigleder, Constantin Pape, Alberto Bailoni, Salva Duran-Nebreda, George W Bassel, Jan U Lohmann, Miltos Tsiantis, Fred A Hamprecht, Kay Schneitz, Alexis Maizel, Anna Kreshuk
Published 2020-07-01