SimSpliceEvol: alternative splicing-aware simulation of biological sequence evolution

by Esaie Kuitche, Safa Jammali, Aïda Ouangraoua
Published 2019-12-01

SplicedFamAlign: CDS-to-gene spliced alignment and identification of transcript orthology groups

by Safa Jammali, Jean-David Aguilar, Esaie Kuitche, Aïda Ouangraoua
Published 2019-03-01

Reconstructing the history of a WD40 beta-propeller tandem repeat using a phylogenetically informed algorithm

by Philippe Lavoie-Mongrain, Mahdi Belcaid, Aïda Ouangraoua, Anne Bergeron, Guylaine Poisson
Published 2015-05-01

Aligning coding sequences with frameshift extension penalties

by Safa Jammali, Esaie Kuitche, Ayoub Rachati, François Bélanger, Michelle Scott, Aïda Ouangraoua
Published 2017-03-01

Deep transcriptome annotation enables the discovery and functional characterization of cryptic small proteins

by Sondos Samandi, Annie V Roy, Vivian Delcourt, Jean-François Lucier, Jules Gagnon, Maxime C Beaudoin, Benoît Vanderperre, Marc-André Breton, Julie Motard, Jean-François Jacques, Mylène Brunelle, Isabelle Gagnon-Arsenault, Isabelle Fournier, Aida Ouangraoua, Darel J Hunting, Alan A Cohen, Christian R Landry, Michelle S Scott, Xavier Roucou
Published 2017-10-01