Curated BLAST for Genomes

by Morgan N. Price, Adam P. Arkin
Published 2019-03-01

The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20

by Morgan N Price, Jayashree eRay, Kelly M. Wetmore, Jennifer V. Kuehl, Bauer, eStefan, Adam M. Deutschbauer, Adam P. Arkin, Adam P. Arkin, Adam P. Arkin
Published 2014-10-01

FastBLAST: homology relationships for millions of proteins.

by Morgan N Price, Paramvir S Dehal, Adam P Arkin
Published 2008-01-01

Orthologous transcription factors in bacteria have different functions and regulate different genes.

by Morgan N Price, Paramvir S Dehal, Adam P Arkin
Published 2007-09-01

FastTree 2--approximately maximum-likelihood trees for large alignments.

by Morgan N Price, Paramvir S Dehal, Adam P Arkin
Published 2010-03-01

Design and diversity in bacterial chemotaxis: a comparative study in Escherichia coli and Bacillus subtilis.

by Christopher V Rao, John R Kirby, Adam P Arkin
Published 2004-02-01

Correction: The Life-Cycle of Operons

by Morgan N Price, Adam P Arkin, Eric J Alm
Published 2006-07-01

GapMind: Automated Annotation of Amino Acid Biosynthesis

by Morgan N. Price, Adam M. Deutschbauer, Adam P. Arkin
Published 2020-06-01

Correction: The Life-Cycle of Operons.

by Morgan N Price, Adam P Arkin, Eric J Alm
Published 2006-07-01

The life-cycle of operons.

by Morgan N Price, Adam P Arkin, Eric J Alm
Published 2006-06-01

Four families of folate-independent methionine synthases.

by Morgan N Price, Adam M Deutschbauer, Adam P Arkin
Published 2021-02-01

Computational models of HIV-1 resistance to gene therapy elucidate therapy design principles.

by Sharon Aviran, Priya S Shah, David V Schaffer, Adam P Arkin
Published 2010-08-01

Detailed simulations of cell biology with Smoldyn 2.1.

by Steven S Andrews, Nathan J Addy, Roger Brent, Adam P Arkin
Published 2010-03-01

PaperBLAST: Text Mining Papers for Information about Homologs

by Morgan N. Price, Adam P. Arkin, Morgan G. I. Langille
Published 2017-08-01

Design and construction of a double inversion recombination switch for heritable sequential genetic memory.

by Timothy S Ham, Sung K Lee, Jay D Keasling, Adam P Arkin
Published 2008-07-01

Validating regulatory predictions from diverse bacteria with mutant fitness data.

by Shiori Sagawa, Morgan N Price, Adam M Deutschbauer, Adam P Arkin
Published 2017-01-01

A Comparison of the Costs and Benefits of Bacterial Gene Expression.

by Morgan N Price, Kelly M Wetmore, Adam M Deutschbauer, Adam P Arkin
Published 2016-01-01

Genetic selection for context-dependent stochastic phenotypes: Sp1 and TATA mutations increase phenotypic noise in HIV-1 gene expression.

by Kathryn Miller-Jensen, Ron Skupsky, Priya S Shah, Adam P Arkin, David V Schaffer
Published 2013-01-01

HIV promoter integration site primarily modulates transcriptional burst size rather than frequency.

by Ron Skupsky, John C Burnett, Jonathan E Foley, David V Schaffer, Adam P Arkin
Published 2010-09-01

Control of stochastic gene expression by host factors at the HIV promoter.

by John C Burnett, Kathryn Miller-Jensen, Priya S Shah, Adam P Arkin, David V Schaffer
Published 2009-01-01