Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology.

by Adam C English, Stephen Richards, Yi Han, Min Wang, Vanesa Vee, Jiaxin Qu, Xiang Qin, Donna M Muzny, Jeffrey G Reid, Kim C Worley, Richard A Gibbs
Published 2012-01-01

SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads

by Oliver A. Hampton, Adam C. English, Mark Wang, William J. Salerno, Yue Liu, Donna M. Muzny, Yi Han, David A. Wheeler, Kim C. Worley, James R. Lupski, Richard A. Gibbs
Published 2017-10-01

Functional equivalence of genome sequencing analysis pipelines enables harmonized variant calling across human genetics projects

by Allison A. Regier, Yossi Farjoun, David E. Larson, Olga Krasheninina, Hyun Min Kang, Daniel P. Howrigan, Bo-Juen Chen, Manisha Kher, Eric Banks, Darren C. Ames, Adam C. English, Heng Li, Jinchuan Xing, Yeting Zhang, Tara Matise, Goncalo R. Abecasis, Will Salerno, Michael C. Zody, Benjamin M. Neale, Ira M. Hall
Published 2018-10-01