Assembly Scaffolding with Mate-Pair Reads Using FM-Index

by LIU, YU-TING, 劉育廷
Published 2016

Conversion of Mate-Pair Reads into Long Sequences for Improving Assembly Scaffolding

by LEE, CHAO-HUNG, 李昭宏
Published 2016

Conversion of Mate-Pair Reads into Long Sequences for Improving Genome Assembly

by Wei-Che Liang, 梁維哲
Published 2016

A Scaffold Analysis Tool Using Mate-Pair Information in Genome Sequencing

by Pan-Gyu Kim, Hwan-Gue Cho, Kiejung Park
Published 2008-01-01

Mate-pair sequencing identifies a cryptic mutation in hereditary pulmonary arterial hypertension

by Sarah J. Chalmers, Stephen J. Murphy, Laura L. Thompson, Nicole L. Hoppman, James B. Smadbeck, Jessica R. Balcom, Faye R. Harris, Robert P. Frantz, George Vasmatzis, Mark E. Wylam
Published 2020-06-01

High-resolution detection of chromosomal rearrangements in leukemias through mate pair whole genome sequencing.

by Anh Nhi Tran, Fulya Taylan, Vasilios Zachariadis, Ingegerd Ivanov Öfverholm, Anna Lindstrand, Francesco Vezzi, Britta Lötstedt, Magnus Nordenskjöld, Ann Nordgren, Daniel Nilsson, Gisela Barbany
Published 2018-01-01

NxRepair: error correction in de novo sequence assembly using Nextera mate pairs

by Rebecca R. Murphy, Jared O’Connell, Anthony J. Cox, Ole Schulz-Trieglaff
Published 2015-06-01

Assessing the benefits of using mate-pairs to resolve repeats in de novo short-read prokaryotic assemblies

by Pop Mihai, Kingsford Carl, Wetzel Joshua
Published 2011-04-01

Mate-Pair Sequencing as a Powerful Clinical Tool for the Characterization of Cancers with a DNA Viral Etiology

by Ge Gao, David I. Smith
Published 2015-08-01

Structural alterations from multiple displacement amplification of a human genome revealed by mate-pair sequencing.

by Xiang Jiao, Magnus Rosenlund, Sean D Hooper, Christian Tellgren-Roth, Liqun He, Yutao Fu, Jonathan Mangion, Tobias Sjöblom
Published 2011-01-01

Prenatal characterization of a novel inverted SMAD2 duplication by mate pair sequencing in a fetus with dextrocardia

by Cinthya J. Zepeda‐Mendoza, Anna Essendrup, Stephanie A. Smoley, Sarah H. Johnson, Nicole L Hoppman, George Vasmatzis, Daniel L. Jackson, Hutton M. Kearney, Linda B. Baughn
Published 2021-02-01

Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing.

by Constantia Aristidou, Costas Koufaris, Athina Theodosiou, Mads Bak, Mana M Mehrjouy, Farkhondeh Behjati, George Tanteles, Violetta Christophidou-Anastasiadou, Niels Tommerup, Carolina Sismani
Published 2017-01-01

Cryptic breakpoint identified by whole-genome mate-pair sequencing in a rare paternally inherited complex chromosomal rearrangement

by Constantia Aristidou, Athina Theodosiou, Andria Ketoni, Mads Bak, Mana M. Mehrjouy, Niels Tommerup, Carolina Sismani
Published 2018-06-01

Integrated Analysis of Whole-Genome Paired-End and Mate-Pair Sequencing Data for Identifying Genomic Structural Variations in Multiple Myeloma

by Rendong Yang, Li Chen, Scott Newman, Khanjan Gandhi, Gregory Doho, Carlos S. Moreno, Paula M. Vertino, Leon Bernal-Mizarchi, Sagar Lonial, Lawrence H. Boise, Michael Rossi, Jeanne Kowalski, Zhaohui S. Qin
Published 2014-01-01

Whole-genome mate-pair sequencing of apparently balanced chromosome rearrangements reveals complex structural variations: two case studies

by Ya-Qi Tan, Yue-Qiu Tan, De-Hua Cheng
Published 2020-05-01

Integrated Analysis of Whole-Genome Paired-End and Mate-Pair Sequencing Data for Identifying Genomic Structural Variations in Multiple Myeloma

by Rendong Yang, Li Chen, Scott Newman, Khanjan Gandhi, Gregory Doho, Carlos S. Moreno, Paula M. Vertino, Leon Bernal-Mizarchi, Sagar Lonial, Lawrence H. Boise, Michael Rossi, Jeanne Kowalski, Zhaohui S. Qin
Published 2014-09-01

SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads

by Oliver A. Hampton, Adam C. English, Mark Wang, William J. Salerno, Yue Liu, Donna M. Muzny, Yi Han, David A. Wheeler, Kim C. Worley, James R. Lupski, Richard A. Gibbs
Published 2017-10-01

Correction: Accurate Breakpoint Mapping in Apparently Balanced Translocation Families with Discordant Phenotypes Using Whole Genome Mate-Pair Sequencing.

by PLOS ONE Staff
Published 2017-01-01

Genetic Analysis Using an Isogenic Mating Pair of Aspergillus fumigatus Identifies Azole Resistance Genes and Lack of MAT Locus's Role in Virulence.

by Liliana Losada, Janyce A Sugui, Michael A Eckhaus, Yun C Chang, Stephanie Mounaud, Abigail Figat, Vinita Joardar, Suman B Pakala, Suchitra Pakala, Pratap Venepally, Natalie Fedorova, William C Nierman, Kyung J Kwon-Chung
Published 2015-04-01

An Improved Genome Assembly of Azadirachta indica A. Juss.

by Neeraja M. Krishnan, Prachi Jain, Saurabh Gupta, Arun K. Hariharan, Binay Panda
Published 2016-07-01