Relationships Between Gastrointestinal Parasite Infections and the Fecal Microbiome in Free-Ranging Western Lowland Gorillas

by Klára Vlčková, Klára Vlčková, Barbora Pafčo, Klára J. Petrželková, Klára J. Petrželková, Klára J. Petrželková, David Modrý, David Modrý, David Modrý, Angelique Todd, Carl J. Yeoman, Manolito Torralba, Brenda A. Wilson, Brenda A. Wilson, Rebecca M. Stumpf, Rebecca M. Stumpf, Bryan A. White, Karen E. Nelson, Karen E. Nelson, Steven R. Leigh, Steven R. Leigh, Andres Gomez
Published 2018-06-01

The Importance of Protein Phosphorylation for Signaling and Metabolism in Response to Diel Light Cycling and Nutrient Availability in a Marine Diatom

by Maxine H. Tan, Sarah R. Smith, Kim K. Hixson, Justin Tan, James K. McCarthy, Adam B. Kustka, Andrew E. Allen
Published 2020-07-01

Impact of DNA damaging agents on genome-wide transcriptional profiles in two marine Synechococcus species

by Sasha Gabrielle Tetu, Daniel Aaron Johnson, Deepa R Varkey, Katherine ePhillippy, Rhona K Stuart, Chris eDupont, Karl A Hassan, Brian ePalenik, Ian T Paulsen
Published 2013-08-01

Pan-cancer analysis reveals technical artifacts in TCGA germline variant calls

by Alexandra R. Buckley, Kristopher A. Standish, Kunal Bhutani, Trey Ideker, Roger S. Lasken, Hannah Carter, Olivier Harismendy, Nicholas J. Schork
Published 2017-06-01

Characterization of Pneumococcal Colonization Dynamics and Antimicrobial Resistance Using Shotgun Metagenomic Sequencing in Intensively Sampled South African Infants

by Rendani I. Manenzhe, Felix S. Dube, Felix S. Dube, Meredith Wright, Katie Lennard, Stephanie Mounaud, Stephanie W. Lo, Heather J. Zar, William C. Nierman, Mark P. Nicol, Mark P. Nicol, Clinton Moodley, Clinton Moodley
Published 2020-09-01

Erratum to: Genomic innovations, transcriptional plasticity and gene loss underlying the evolution and divergence of two highly polyphagous and invasive Helicoverpa pest species

by S. L. Pearce, D. F. Clarke, P. D. East, S. Elfekih, K. H. J. Gordon, L. S. Jermiin, A. McGaughran, J. G. Oakeshott, A. Papanicolaou, O. P. Perera, R. V. Rane, S. Richards, W. T. Tay, T. K. Walsh, A. Anderson, C. J. Anderson, S. Asgari, P. G. Board, A. Bretschneider, P. M. Campbell, T. Chertemps, J. T. Christeller, C. W. Coppin, S. J. Downes, G. Duan, C. A. Farnsworth, R. T. Good, L. B. Han, Y. C. Han, K. Hatje, I. Horne, Y. P. Huang, D. S. T. Hughes, E. Jacquin-Joly, W. James, S. Jhangiani, M. Kollmar, S. S. Kuwar, S. Li, N-Y. Liu, M. T. Maibeche, J. R. Miller, N. Montagne, T. Perry, J. Qu, S. V. Song, G. G. Sutton, H. Vogel, B. P. Walenz, W. Xu, H-J. Zhang, Z. Zou, P. Batterham, O. R. Edwards, R. Feyereisen, R. A. Gibbs, D. G. Heckel, A. McGrath, C. Robin, S. E. Scherer, K. C. Worley, Y. D. Wu
Published 2017-08-01

A Microbiomic Analysis in African Americans with Colonic Lesions Reveals Streptococcus sp.VT162 as a Marker of Neoplastic Transformation

by Hassan Brim, Shibu Yooseph, Edward Lee, Zaki A. Sherif, Muneer Abbas, Adeyinka O. Laiyemo, Sudhir Varma, Manolito Torralba, Scot E. Dowd, Karen E. Nelson, Wimal Pathmasiri, Susan Sumner, Willem de Vos, Qiaoyi Liang, Jun Yu, Erwin Zoetendal, Hassan Ashktorab
Published 2017-11-01

RNA: An Expanding View of Function and Evolution

by Xinwei Han, Yuan Chen, Liuyang Wang, Wenwen Fang, Ning Zhang, Qiyun Zhu
Published 2015-01-01

A mosaic monoploid reference sequence for the highly complex genome of sugarcane

by Olivier Garsmeur, Gaetan Droc, Rudie Antonise, Jane Grimwood, Bernard Potier, Karen Aitken, Jerry Jenkins, Guillaume Martin, Carine Charron, Catherine Hervouet, Laurent Costet, Nabila Yahiaoui, Adam Healey, David Sims, Yesesri Cherukuri, Avinash Sreedasyam, Andrzej Kilian, Agnes Chan, Marie-Anne Van Sluys, Kankshita Swaminathan, Christopher Town, Hélène Bergès, Blake Simmons, Jean Christophe Glaszmann, Edwin van der Vossen, Robert Henry, Jeremy Schmutz, Angélique D’Hont
Published 2018-07-01

Integrative analysis of large scale transcriptome data draws a comprehensive landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms

by Achal Rastogi, Uma Maheswari, Richard G. Dorrell, Fabio Rocha Jimenez Vieira, Florian Maumus, Adam Kustka, James McCarthy, Andy E. Allen, Paul Kersey, Chris Bowler, Leila Tirichine
Published 2018-03-01

Contrasting genomic properties of free-living and particle-attached microbial assemblages within a coastal ecosystem

by Maria W Smith, Lisa eZeigler Allen, Andrew E Allen, Lydie eHerfort, Holly M Simon
Published 2013-05-01

Comparative analysis of the Rotarix™ vaccine strain and G1P[8] rotaviruses detected before and after vaccine introduction in Belgium

by Mark Zeller, Elisabeth Heylen, Sana Tamim, John K. McAllen, Ewen F. Kirkness, Asmik Akopov, Sarah De Coster, Marc Van Ranst, Jelle Matthijnssens
Published 2017-01-01

Rapid CRISPR/Cas9 Editing of Genotype IX African Swine Fever Virus Circulating in Eastern and Central Africa

by Hussein M. Abkallo, Nicholas Svitek, Bernard Oduor, Elias Awino, Sonal P. Henson, Samuel O. Oyola, Stephen Mwalimu, Nacrya Assad-Garcia, Walter Fuchs, Sanjay Vashee, Lucilla Steinaa
Published 2021-08-01

Single-Cell Genomics for Virology

by Angela Ciuffi, Sylvie Rato, Amalio Telenti
Published 2016-05-01

Genomic adaptations in information processing underpin trophic strategy in a whole-ecosystem nutrient enrichment experiment

by Jordan G Okie, Amisha T Poret-Peterson, Zarraz MP Lee, Alexander Richter, Luis D Alcaraz, Luis E Eguiarte, Janet L Siefert, Valeria Souza, Chris L Dupont, James J Elser
Published 2020-01-01

Influenza-Induced Oxidative Stress Sensitizes Lung Cells to Bacterial-Toxin-Mediated Necroptosis

by Norberto Gonzalez-Juarbe, Ashleigh N. Riegler, Alexander S. Jureka, Ryan P. Gilley, Jeffrey D. Brand, John E. Trombley, Ninecia R. Scott, Maryann P. Platt, Peter H. Dube, Chad M. Petit, Kevin S. Harrod, Carlos J. Orihuela
Published 2020-08-01

Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators

by Miao Wu, J. Scott P. McCain, Elden Rowland, Rob Middag, Mats Sandgren, Andrew E. Allen, Erin M. Bertrand
Published 2019-08-01

Establishing microbial composition measurement standards with reference frames

by James T. Morton, Clarisse Marotz, Alex Washburne, Justin Silverman, Livia S. Zaramela, Anna Edlund, Karsten Zengler, Rob Knight
Published 2019-06-01

Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla

by Robert VanBuren, Ching Man Wai, Shujun Ou, Jeremy Pardo, Doug Bryant, Ning Jiang, Todd C. Mockler, Patrick Edger, Todd P. Michael
Published 2018-01-01

Pathogenic <italic toggle="yes">Vibrio</italic> Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes

by Rachel E. Diner, Drishti Kaul, Ariel Rabines, Hong Zheng, Joshua A. Steele, John F. Griffith, Andrew E. Allen
Published 2021-08-01