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Showing 1 - 20 results of 77 for search '"BLOSUM"', query time: 0.68s Refine Results
  1. 1
    Background frequencies for residue variability estimates: BLOSUM revisited
    by Reš I, Mihalek I, Lichtarge O
    Published 2007-12-01
    “... revisit the original construction of BLOSUM matrices, and re-interpret them as mutation probability...”
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    Article
  2. 2
    RBLOSUM performs better than CorBLOSUM with lesser error per query
    Subjects: “...BLOSUM...”
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    Article
  3. 3
    Music-BLOSUM Music Similarity Matrix and Its Applications in Multipe Music Performance Alignment
    by Liu, Che-Chen, 劉哲辰
    Published 2011
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  4. 4
    Identification of Critical Amino Acid Candidates by Cross-reference Voting based on Blosum62 Scoring Matrix
    by Meng Shan Lin, 林孟珊
    Published 2004
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  5. 5
    Optimization of Substitution Matrix for Sequence Alignment of Major Capsid Proteins of Human Herpes Simplex Virus
    by Vipan Kumar Sohpal, Amarpal Singh, Apurba Dey
    Published 2011-12-01
    Subjects: “...Blosum...”
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    Article
  6. 6
    Protein Secondary Structure Prediction Using Support Vector Machines, Nueral Networks and Genetic Algorithms
    by Reyaz-Ahmed, Anjum B
    Published 2007
    Subjects: “...BLOSUM62...”
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  7. 7
    Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix
    “... related proteins. The algorithm, called BLOSUM-FIRE couples a newer and improved version of the original...”
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  8. 8
    Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix
    by Ndhlovu, Andrew
    Published 2015
    “... was reimplemented and coupled with a conventional BLOSUM substitution matrix to produce a new implementation...”
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  9. 9
    Visual Search and Analysis in Molecular Biology
    by Heß, Martin Philipp
    Published 2018
    “... of the computed MSAs and to effectively refine them to improve their accuracy. We present the novel CorBLOSUM...”
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  10. 10
    A novel substitution matrix fitted to the compositional bias in Mollicutes improves the prediction of homologous relationships
    “... such as those in the BLOSUM series fail to accurately estimate alignment scores and statistical significance...”
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    Article
  11. 11
    A novel series of compositionally biased substitution matrices for comparing <it>Plasmodium </it>proteins
    by Pizzi Elisabetta, Brick Kevin
    Published 2008-05-01
    “...<p>Abstract</p> <p>Background</p> <p>The most common substitution matrices currently used (BLOSUM...”
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    Article
  12. 12
    Forensic verification of operating system activity via novel data, acquisition and analysis techniques
    by Graves, Jamie Robert
    Published 2009
    “..., which is compared against the de facto, biologically generated, BLOSUM62 scoring matrix. The impact...”
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  13. 13
    Application of Fuzzy Set Theory and Hybrid Genetic Algorithm to Gene Sequence Alignment Problems
    by Tsun-Jen Cheng, 鄭尊仁
    Published 2005
    “... for 62 blocks substitution matrix (BLOSUM) in sequence aligning, and integrated with the Genetic...”
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  14. 14
    Bridging the gaps in statistical models of protein alignment
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    Article
  15. 15
    Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
    by Rognes Torbjørn
    Published 2011-06-01
    “... as BLAST when using the BLOSUM50 score matrix, while BLAST was about twice as fast as SWIPE for the BLOSUM...”
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    Article
  16. 16
    Finding the best biological pairwise alignment through genetic algorithm
    “... is associated with a fitness function based on BLOSUM50 substitution matrix....”
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    Article
  17. 17
    Protein sequence alignment methods for remote homologs detection and their applications in protein functional assignment and tertiary structure prediction
    by Chen, Chih-Chieh, 陳志杰
    Published 2010
    “... conserved than amino acid sequence. Here, we developed a BLOSUM-like substitution matrix, S2A2, which was a...”
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  18. 18
    PFASUM: a substitution matrix from Pfam structural alignments
    by Frank Keul, Martin Hess, Michael Goesele, Kay Hamacher
    Published 2017-06-01
    “... entropies to the commonly used substitution matrices BLOSUM50, BLOSUM62, PAM250, VTML160 and VTML200...”
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    Article
  19. 19
    Development of novel Classical and Quantum Information Theory Based Methods for the Detection of Compensatory Mutations in MSAs
    by Gültas, Mehmet
    Published 2014
    “... hauptsächlich BLOSUM62-unähnliche Paare von Aminosäuren als ein Modell von kompensatorischen Mutationen und...”
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    Doctoral Thesis
  20. 20
    On Evolution, Structure and Dynamics in Potassium Channels
    by Keul, Frank
    Published 2018
    “... in comparison to BLOSUM matrices for channel protein sequences. We find that these novel PFASUM matrices...”
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