-
1
-
2
-
3by Venkat Subramaniam Rathinakannan, Hannu-Pekka Schukov, Samuel Heron, Johanna Schleutker, Csilla Sipeky“... of the currently available robust annotation tools, like ANNOVAR, are command-line based tools which require a...”
Published 2020-01-01
Get full text
Article -
4“... Depletion (CADD), ANNOVAR, and Variant Effect Predictor (VEP), we highlighted 561 potentially detrimental...”
Get full text
Article -
5by N. V. Shcherbakova, A. I. Ershova, A. A. Suvorova, E. Y. Hlebus, A. N. Meshkov, S. A. Boytsov“... of the data were performed. Point mutations were annotated using ANNOVAR program, as well as comparison with a...”
Published 2015-09-01
Get full text
Article -
6“... studies. TAPES can quickly assign ACMG criteria using ANNOVAR or VEP annotated files and implements a...”
Get full text
Article -
7by N. V. Shcherbakova, A. I. Ershova, A. A. Suvorova, E. Y. Hlebus, A. N. Meshkov, S. A. Boytsov“... annotated using ANNOVAR program, as well as comparison with a number of specialized databases was done...”
Published 2015-09-01
Get full text
Article -
8
-
9by Shumaila Sayyab, Agnese Viluma, Kerstin Bergvall, Emma Brunberg, Vidhya Jagannathan, Tosso Leeb, Göran Andersson, Tomas F. Bergström“... and heterozygous in the parents. Using the computer software packages ANNOVAR and SIFT to functionally annotate...”
Published 2016-03-01
Get full text
Article -
10“... the genetic variants with multiple annotations tools, ANNOVAR and SnpEff and compared the differential results...”
Get full text
Article -
11by Chiara Cimmaruta, Valentina Citro, Giuseppina Andreotti, Ludovica Liguori, Maria Vittoria Cubellis, Bruno Hay Mele“... if these scores correlate with disease severity. Results wANNOVAR, a popular tool that can generate several...”
Published 2018-11-01
Get full text
Article -
12by Chen-Chi Wu, Yin-Hung Lin, Ying-Chang Lu, Pei-Jer Chen, Wei-Shiung Yang, Chuan-Jen Hsu, Pei-Lung Chen“... on the Illumina HiSeq2000, and applied BWA, SAMtools, Picard, GATK, Variant Tools, ANNOVAR, and IGV...”
Published 2013-01-01
Get full text
Article -
13by Nelmes, David-John“... reports that Next Generation Sequencing (NGS) with software VarScan with Annovar, can detect mutations...”
Published 2018
Get full text
-
14“... using the Human Splicing Finder and MaxEnt online software and Annovar computer software. CONCLUSION: c...”
Get full text
Article -
15“... nucleotide variants (SNV) calling, we used Varscan2. Annotation of mutation was performed using ANNOVAR...”
Get full text
Article -
16by John Alexander, Dimitris Mantzaris, Marianthi Georgitsi, Petros Drineas, Peristera Paschou“... information and additional open-source annotations using accessible databases via ANNOVAR. The available...”
Published 2017-07-01
Get full text
Article -
17“... SortSam, MarkDuplicates, GATK-BQSR and ANNOVAR). Variants were filtering according to the allele...”
Get full text
Others -
18“..., ANNOVAR, and IGV for bioinformatics analyses. Criteria for data filtering included: allele frequencies <5...”
Get full text
Others -
19“... frequency, functional impact with annovar insilico algorithms. Further variant information from significant...”
Get full text
Article -
20by Kei Onodera, Yoshiaki Arimura, Hiroyuki Isshiki, Kentaro Kawakami, Kanna Nagaishi, Kentaro Yamashita, Eiichiro Yamamoto, Takeshi Niinuma, Yasuyoshi Naishiro, Hiromu Suzuki, Kohzoh Imai, Yasuhisa Shinomura“... implemented in ANNOVAR in combination with identity-by-descent (IBD), subsequently were subjected...”
Published 2015-01-01
Get full text
Article