Oncogenic drivers in 11q13 associated with prognosis and response to therapy in advanced oropharyngeal carcinomas

by Barros-Filho, M.C, Carvalho, A.L, Chulam, T., Drigo, S.A, Hatakeyama, M., Kowalski, L.P, Marchi, F.A, Nicolau, U.R, Pinto, C.A.L, Reis-Rosa, L.A, Rogatto, S.R, Scapulatempo-Neto, C.
Published 2018

Integrative analysis of hub genes and key pathway in two subtypes of diffuse large B-cell lymphoma by bioinformatics and basic experiments

by Charwudzi, A., Hu, L., Li, Q., Meng, Y., Zhai, Z., Zhu, W.
Published 2021

CTR9-mediated JAK2/STAT3 pathway promotes the proliferation, migration, and invasion of human glioma cells

by Chen, J., He, G., Xu, Y., Zhang, Y.
Published 2021

Multilocus sequence typing analysis and second-generation sequencing analysis of Salmonella Wandsworth

by Lu, Y., Wang, Y., Xu, X., Zhang, C.
Published 2021

Bioinformatics analysis reveals immune prognostic markers for overall survival of colorectal cancer patients: a novel machine learning survival predictive system

by Huang, L., Li, J., Wang, P., Zhang, Z.
Published 2022

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

by Aleksander, S., Alexander, M., Cherry, J.M, Douglass, E., Engel, S.R, Karra, K., Miyasato, S.R, Nash, R.S, Simison, M., Skrzypek, M.S, Weng, S., Wong, E.D
Published 2022

Zebrafish information network, the knowledgebase for Danio rerio research

by Bradford, Y.M, Eagle, A., Fashena, D., Frazer, K., Howe, D.G, Martin, R., Paddock, H., Pich, C., Ramachandran, S., Ruzicka, L., Singer, A., Van Slyke, C.E, Westerfield, M.
Published 2022

FlyBase: a guided tour of highlighted features

by Agapite, J., Attrill, H., Calvi, B.R, Crosby, M.A, Dos Santos, G., Goodman, J.L, Goutte-Gattat, D., Gramates, L.S, Jenkins, V.K, Kaufman, T., Larkin, A., Matthews, B.B, Millburn, G., Strelets, V.B
Published 2022

WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans

by Arnaboldi, V., Becerra, A., Berriman, M., Cain, S., Chan, J., Chen, W.J, Cho, J., da Veiga Beltrame, E., Davis, P., Diamantakis, S., Gao, S., Grigoriadis, D., Grove, C.A, Harris, T.W, Howe, K.L, Kishore, R., Le, T., Lee, R.Y.N, Luypaert, M., Müller, H.-M, Nakamura, C., Nuin, P., Paulini, M., Quinton-Tulloch, M., Raciti, D., Rodgers, F.H, Russell, M., Schedl, T., Schindelman, G., Singh, A., Stein, L., Sternberg, P.W, Stickland, T., Van Auken, K., Wang, Q., Williams, G., Wright, A.J, Yook, K., Zarowiecki, M.
Published 2022

Harmonizing model organism data in the Alliance of Genome Resources

by Alliance of Genome Resources Consortium
Published 2022

MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses

by Brodie, K., De Pons, J.L, Demos, W.M, Dwinell, M.R, Gibson, A.C, Hayman, G.T, Hill, M.L, Hoffman, M.J, Kaldunski, M.L, Kwitek, A.E, Lamers, L., Laulederkind, S.J.F, Lin, C.-W, Nalabolu, H.S, Smith, J.R, Thorat, K., Thota, J., Tutaj, M., Tutaj, M.A, Vedi, M., Wang, S.-J, Zacher, S.
Published 2022

A selection pressure landscape for 870 human polygenic traits

by Lin, G.N, Pan, W., Qian, W., Shi, Y., Song, W., Wang, W., Yu, S., Zhao, M.
Published 2021

Dynamic assessing silica particle-induced pulmonary fibrosis and associated regulation of long non-coding RNA expression in Wistar rats

by Jia, Q., Peng, C., Qi, X., Sai, L., Yu, G., Zhang, J., Zheng, Y.
Published 2021

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research

by Badi, L., Ebeling, M., Hatje, K., Julien-Laferriere, A., Kam-Thong, T., Kang, A.S.W, Mädler, S.C, Phan, M., Schmucki, R., Schwalie, P.C, Sonrel, A., Ulrich, E., Wyss, L., Zhang, J.D
Published 2021

Extracting multi-way chromatin contacts from Hi-C data

by Hyeon, C., Liu, L., Zhang, B.
Published 2021

TAGOPSIN: collating taxa-specific gene and protein functional and structural information

by Bundhoo, E., Ghoorah, A.W, Jaufeerally-Fakim, Y.
Published 2021

Taxallnomy: an extension of NCBI Taxonomy that produces a hierarchically complete taxonomic tree

by Ortega, J.M, Sakamoto, T.
Published 2021

Estimating sequencing error rates using families

by Chrisman, B., Jung, J.-Y, Paskov, K., Stockham, N.T, Sun, M.W, Varma, M., Wall, D.P, Washington, P.
Published 2021

ATAV: a comprehensive platform for population-scale genomic analyses

by Bhardwaj, N., Cui, H., Goldstein, D.B, Hostyk, J.A, Povysil, G., Ren, Z.
Published 2021

cognac: rapid generation of concatenated gene alignments for phylogenetic inference from large, bacterial whole genome sequencing datasets

by Crawford, R.D, Snitkin, E.S
Published 2021