differential expression analysis RNA 3 article 3 controlled study 3 human 3 Agnostic 2 Article 2 RNA sequencing 2 RNA-Seq 2 artifact 2 artificial neural network 2 autoencoder 2 cell component 2 classifier 2 cleaning 2 data analysis 2 data set 2 deep neural network 2 gene expression 2 gene set enrichment analysis 2 genetics 2 noise 2 noise reduction 2 research 2 single cell RNA seq 2 transcriptomics 2 Algorithms 1 Animals 1 Apold1 1 BDNF 1