A combination of ssGSEA and mass cytometry identifies immune microenvironment in muscle-invasive bladder cancer

by Feng, C., Hu, J., Huang, H., Lai, Z., Li, T., Li, Z., Lu, Q., Pan, L., Tang, Z., Tao, Y., Wang, Q., Wang, X., Xie, Y.
Published 2021

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research

by Badi, L., Ebeling, M., Hatje, K., Julien-Laferriere, A., Kam-Thong, T., Kang, A.S.W, Mädler, S.C, Phan, M., Schmucki, R., Schwalie, P.C, Sonrel, A., Ulrich, E., Wyss, L., Zhang, J.D
Published 2021

Clone decomposition based on mutation signatures provides novel insights into mutational processes

by Hamada, M., Matsutani, T.
Published 2021

A spatio-temporal model to reveal oscillator phenotypes in molecular clocks: Parameter estimation elucidates circadian gene transcription dynamics in single-cells

by Brancaccio, M., Finkenstädt, B., Hastings, M., Johansen, A.M, Unosson, M.
Published 2021

Cell-to-cell and type-to-type heterogeneity of signaling networks: insights from the crowd

by Bodenmiller, B., Cao, W., Chung, V., Driessen, A., Gabor, A., Guo, B., Saez-Rodriguez, J., Shen, H., Single Cell Signaling in Breast Cancer DREAM Consortium members, Tanevski, J., Tognetti, M., Yu, T.
Published 2021

Stem cell heterogeneity of mononucleated cells from murine peripheral blood: Molecular analysis

by Megat Abdul Wahab, R., Senafi, S., Yazid, M.D, Zainal Ariffin, S.H, Zainal Ariffin, Z.

Single cell biology—a Keystone Symposia report

by Alon, U., Arbel-Goren, R., Arekatla, G., Balzer, M.S, Cable, J., Cai, L., Domingos, A.I, Elowitz, M.B, Fan, J., Gaiti, F., Galloway, K.E, Garcia, H.G, Greenwald, N.F, Guilliams, M., Habib, N., Hamel, R., Hamidzada, H., Hong, C.K.Y, Itzkovitz, S., Junker, J.P, Keren, L., Klein, A.M, Liberali, P., Morris, S.A, Murray, J.I, Pfau, S.J, Quake, S.R, Raj, A., Ratz, M., Romeike, M., Rulands, S., Santos, S.D.M, Shalek, A.K, Spencer, S.L, Stergachis, A.B, Streets, A., Trapnell, C., Vento-Tormo, R., Wang, B., Whited, J., Yanai, I., Zhang, N.R
Published 2021

Matrix adhesion and remodeling diversifies modes of cancer invasion across spatial scales

by Bhat, R., Jolly, M.K, Pramanik, D.
Published 2021

Modeling glioblastoma heterogeneity as a dynamic network of cell states

by Dalmo, E., Doroszko, M., Elgendy, R., Jörnsten, R., Larsson, I., Nelander, S., Niklasson, M., Segerman, A., Westermark, B.
Published 2021