The Fecal Microbiome and Metabolome of Pitt Hopkins Syndrome, a Severe Autism Spectrum Disorder

by Adams, J.B, Dilmore, A.H, Dorrestein, P.C, Elijah, E., Knight, R., Krajmalnik-Brown, R., McDonald, D., Nguyen, T.T
Published 2021

CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences

by Dandekar, T., Fasemore, A.M, Förstner, K.U, Frangoulidis, D., Helbich, A., Vergnaud, G., Walter, M.C
Published 2021

Validation of amplicon-based next generation sequencing panel for second-tier test in newborn screening for inborn errors of metabolism

by Chan, T.C.H, Lau, W.T, Mak, C.M, Tsang, K.Y, Wong, T.K, Yeung, M.C.W
Published 2021

Concatenation of paired-end reads improves taxonomic classification of amplicons for profiling microbial communities

by Chain, F.J.J, Dacey, D.P
Published 2021

A targeted solution for estimating the cell-type composition of bulk samples

by Aberg, K.A, Tran, C.J, van den Oord, E.J.C.G, Xie, L.Y, Zhao, M.
Published 2021

FRugally Optimized DNA Octomer (FRODO) qPCR Measurement of HIV and SIV in Human and Nonhuman Primate Samples

by Brenchley, J.M, Langner, C.A
Published 2021

CRISPR-Cas9 Based Genome Editing in Wheat

by Clarke, M., Harwood, W.A, Hayta, S., Smedley, M.A
Published 2021

Spatiotemporal Heterogeneity and Intragenus Variability in Rhizobacterial Associations with Brassica rapa Growth

by Brock, M.T, Calder, W.J, Klasek, S.A, Maïgnien, L., Morrison, H.G, Weinig, C.
Published 2022

Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows

by Adams, G., Bauer, M.R, Berenzy, D., Dewey, H.B, Dobbins, S.T, Figueroa, K., Gladden-Young, A., Hooper, D., Kales, S., Lagerborg, K.A, Lemieux, J.E, Loreth, C., MacInnis, B.L, Normandin, E., Park, D.J, Pearlman, L.R, Pierce, V.M, Reilly, S.K, Sabeti, P.C, Shaw, B.M, Shenoy, E.S, Siddle, K.J, Tewhey, R., Zachary, K.C
Published 2022

Allele-specific polymerase chain reaction for the detection of Alzheimer's disease-related single nucleotide polymorphisms

by Ai-Vyrn, C., Darawi, M.N, Hua, P.P.J, Kamaruzzaman, S.B, Majeed, A.B.A, Pin, T.M, Ramasamy, K.

Multiplex PCR for the concurrent detection and differentiation of salmonella spp., Salmonella Typhi and salmonella Typhimurium

by Chai, L.C, Cheah, Y.K, Ghazali, F.M, Lee, H.Y, Nakaguchi, Y., Nishibuchi, M., Noorlis, A., Pui, C.F, Radu, S., Tang, J.Y.H, Wong, W.C, Zainazor, T.C.T

Metagenomic sequencing of multiple soil horizons and sites in close vicinity revealed novel secondary metabolite diversity

by Angelov, A., Mantri, S.S, Negri, T., Neidhardt, H., Oelmann, Y., Peter, S., Sales-Ortells, H., Ziemert, N.
Published 2021

Microbiome clusters disclose physiologic variances in dairy cows challenged by calving and lipopolysaccharides

by Borda-Molina, D., Camarinha-Silva, A., Dänicke, S., Frahm, J., Grindler, S., Huber, K., Kononov, S.U, Meyer, J., Mezger, B., Saenz, J.S, Seifert, J., Tröscher-Mußotter, J.
Published 2021

Assessing multiplex tiling PCR sequencing approaches for detecting genomic variants of SARS-CoV-2 in municipal wastewater

by Glier, M., Kuchinski, K., Lin, X., McVea, D., Mierlo, T.R.-V, Prystajecky, N., Tyson, J.R, Ziels, R.M
Published 2021

Lineage-specific growth curves document large differences in response of individual groups of marine bacteria to the top-down and bottom-up controls

by Fecskeová, L.K, Hanusová, M., Koblížek, M., Piwosz, K., Šantic, D., Šestanovic, S., Šolic, M., Tomaš, A.V
Published 2021

Predicting the presence and abundance of bacterial taxa in environmental communities through flow Cytometric fingerprinting

by Boon, N., Heyse, J., Müller, S., Props, R., Rubbens, P., Schattenberg, F., Waegeman, W.
Published 2021

Composition, succession, and source tracking of microbial communities throughout the traditional production of a farmstead cheese

by D'Amico, D.J, Sun, L.
Published 2021

Learning, visualizing and exploring 16S rRNA structure using an attention-based deep neural network

by Agbavor, F., Mell, J.C, Rosen, G.L, Sokhansanj, B.A, Woloszynek, S., Zhao, Z.
Published 2021

An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes

by Li, T., Ranjard, L., Rodrigo, A.G, Sukumaran, J., Wong, T.K.F, Wu, S.H
Published 2021

Bacteria and archaea synergistically convert glycine betaine to biogenic methane in the formosa cold seep of the south china sea

by Dong, X., Li, L., Song, L., Sun, Q., Xiang, H., Zhang, H., Zhang, S., Zhang, W.
Published 2021