User-friendly tool article 2 Algorithms 1 Autoencoders 1 Batch correction 1 Benchmarking 1 Cancer development 1 Candidate positions 1 Cells 1 Clustering 1 Computer Simulation 1 Cytology 1 Data integration 1 Digital storage 1 Dimensionality reduction 1 Gene interactions 1 Genes 1 High-Throughput Nucleotide Sequencing 1 High-throughput sequencing 1 Learning systems 1 Loss functions 1 Low-dimensional representation 1 Machine Learning 1 Machine learning approaches 1 Molecular process 1 Mosaicism 1 Nucleotides 1 Polymorphism, Single Nucleotide 1 Quality control 1 RNA 1