Integrative analysis of hub genes and key pathway in two subtypes of diffuse large B-cell lymphoma by bioinformatics and basic experiments

by Charwudzi, A., Hu, L., Li, Q., Meng, Y., Zhai, Z., Zhu, W.
Published 2021

Bioinformatics analysis reveals immune prognostic markers for overall survival of colorectal cancer patients: a novel machine learning survival predictive system

by Huang, L., Li, J., Wang, P., Zhang, Z.
Published 2022

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

by Aleksander, S., Alexander, M., Cherry, J.M, Douglass, E., Engel, S.R, Karra, K., Miyasato, S.R, Nash, R.S, Simison, M., Skrzypek, M.S, Weng, S., Wong, E.D
Published 2022

Zebrafish information network, the knowledgebase for Danio rerio research

by Bradford, Y.M, Eagle, A., Fashena, D., Frazer, K., Howe, D.G, Martin, R., Paddock, H., Pich, C., Ramachandran, S., Ruzicka, L., Singer, A., Van Slyke, C.E, Westerfield, M.
Published 2022

FlyBase: a guided tour of highlighted features

by Agapite, J., Attrill, H., Calvi, B.R, Crosby, M.A, Dos Santos, G., Goodman, J.L, Goutte-Gattat, D., Gramates, L.S, Jenkins, V.K, Kaufman, T., Larkin, A., Matthews, B.B, Millburn, G., Strelets, V.B
Published 2022

WormBase in 2022-data, processes, and tools for analyzing Caenorhabditis elegans

by Arnaboldi, V., Becerra, A., Berriman, M., Cain, S., Chan, J., Chen, W.J, Cho, J., da Veiga Beltrame, E., Davis, P., Diamantakis, S., Gao, S., Grigoriadis, D., Grove, C.A, Harris, T.W, Howe, K.L, Kishore, R., Le, T., Lee, R.Y.N, Luypaert, M., Müller, H.-M, Nakamura, C., Nuin, P., Paulini, M., Quinton-Tulloch, M., Raciti, D., Rodgers, F.H, Russell, M., Schedl, T., Schindelman, G., Singh, A., Stein, L., Sternberg, P.W, Stickland, T., Van Auken, K., Wang, Q., Williams, G., Wright, A.J, Yook, K., Zarowiecki, M.
Published 2022

Harmonizing model organism data in the Alliance of Genome Resources

by Alliance of Genome Resources Consortium
Published 2022

MOET: a web-based gene set enrichment tool at the Rat Genome Database for multiontology and multispecies analyses

by Brodie, K., De Pons, J.L, Demos, W.M, Dwinell, M.R, Gibson, A.C, Hayman, G.T, Hill, M.L, Hoffman, M.J, Kaldunski, M.L, Kwitek, A.E, Lamers, L., Laulederkind, S.J.F, Lin, C.-W, Nalabolu, H.S, Smith, J.R, Thorat, K., Thota, J., Tutaj, M., Tutaj, M.A, Vedi, M., Wang, S.-J, Zacher, S.
Published 2022

A selection pressure landscape for 870 human polygenic traits

by Lin, G.N, Pan, W., Qian, W., Shi, Y., Song, W., Wang, W., Yu, S., Zhao, M.
Published 2021

TAGOPSIN: collating taxa-specific gene and protein functional and structural information

by Bundhoo, E., Ghoorah, A.W, Jaufeerally-Fakim, Y.
Published 2021

Taxallnomy: an extension of NCBI Taxonomy that produces a hierarchically complete taxonomic tree

by Ortega, J.M, Sakamoto, T.
Published 2021

ATAV: a comprehensive platform for population-scale genomic analyses

by Bhardwaj, N., Cui, H., Goldstein, D.B, Hostyk, J.A, Povysil, G., Ren, Z.
Published 2021

cognac: rapid generation of concatenated gene alignments for phylogenetic inference from large, bacterial whole genome sequencing datasets

by Crawford, R.D, Snitkin, E.S
Published 2021

Set-theory based benchmarking of three different variant callers for targeted sequencing

by Molina-Mora, J.A, Solano-Vargas, M.
Published 2021

Modeling drug mechanism of action with large scale gene-expression profiles using GPAR, an artificial intelligence platform

by Gao, S., Han, L., Liu, G., Luo, D., Shan, G., Xiao, Z., Zhang, Y., Zhou, W.
Published 2021

H2V: a database of human genes and proteins that respond to SARS-CoV-2, SARS-CoV, and MERS-CoV infection

by Bao, J., Ning, Y., Zhou, N.
Published 2021

mixIndependR: a R package for statistical independence testing of loci in database of multi-locus genotypes

by Planz, J., Song, B., Woerner, A.E
Published 2021

MGEnrichment: A web application for microglia gene list enrichment analysis

by Ciernia, A.V, Jao, J.
Published 2021

GPRuler: Metabolic gene-protein-reaction rules automatic reconstruction

by Damiani, C., Filippo, M.D, Pescini, D.
Published 2021

Identifying prognostic pairwise relationships among bacterial species in microbiome studies

by Devlin, S.M, Martin, A., Ostrovnaya, I.
Published 2021