Agrobacterium 1 Agrobacterium mediated transformations 1 Agrobacterium-mediated transformation 1 Antibiotic selections Antibiotics 1 CRISPR/Cas9 1 Carbon 1 Cellobiohydrolase I 1 DNA 1 Drug tolerance 1 Efficiency 1 Efflux pump inhibitors 1 Gene-function analysis 1 Genes 1 Genetic engineering 1 Genetic manipulations 1 Genome modification 1 High level expression 1 Homologous recombination 1 Linear transformations 1 Mathematical transformations 1 Penicillium funiculosum 1 Plants (botany) 1 Saccharification 1 Transcriptome analysis 1 antibiotic resistance 1 enzyme 1 fungus 1 genetic engineering 1 genome 1