Ontology-aware deep learning enables ultrafast and interpretable source tracking among sub-million microbial community samples from hundreds of niches

The taxonomic structure of microbial community sample is highly habitat-specific, making source tracking possible, allowing identification of the niches where samples originate. However, current methods face challenges when source tracking is scaled up. Here, we introduce a deep learning method base...

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Bibliographic Details
Main Authors: Chen, Z. (Author), Chong, H. (Author), Cui, X. (Author), Dun, Y. (Author), Kang, K. (Author), Ning, K. (Author), Qiu, H. (Author), Zha, Y. (Author)
Format: Article
Language:English
Published: BioMed Central Ltd 2022
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Online Access:View Fulltext in Publisher