HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data

Summary: HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube displays synchronized views of Hi-C contact maps and 3D genome structures with user-friendly annotation and configuration too...

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Bibliographic Details
Main Authors: Hu, Y. (Author), Ma, W. (Author), Pun, S. (Author), Ye, T. (Author)
Format: Article
Language:English
Published: Oxford University Press 2023
Subjects:
Online Access:View Fulltext in Publisher
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LEADER 01230nam a2200217Ia 4500
001 10.1093-bioinformatics-btad154
008 230529s2023 CNT 000 0 und d
020 |a 13674803 (ISSN) 
245 1 0 |a HiCube: interactive visualization of multiscale and multimodal Hi-C and 3D genome data 
260 0 |b Oxford University Press  |c 2023 
856 |z View Fulltext in Publisher  |u https://doi.org/10.1093/bioinformatics/btad154 
856 |z View in Scopus  |u https://www.scopus.com/inward/record.uri?eid=2-s2.0-85159063197&doi=10.1093%2fbioinformatics%2fbtad154&partnerID=40&md5=83a8e76a7cd5fa6ffdeed3c84fa15ad8 
520 3 |a Summary: HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube displays synchronized views of Hi-C contact maps and 3D genome structures with user-friendly annotation and configuration tools, thereby facilitating the study of 3D genome organization and function. © The Author(s) 2023. 
650 0 4 |a article 
650 0 4 |a genome analysis 
650 0 4 |a genomics 
700 1 0 |a Hu, Y.  |e author 
700 1 0 |a Ma, W.  |e author 
700 1 0 |a Pun, S.  |e author 
700 1 0 |a Ye, T.  |e author 
773 |t Bioinformatics