Seqpac: a framework for sRNA-seq analysis in R using sequence-based counts

Motivation: Feature-based counting is commonly used in RNA-sequencing (RNA-seq) analyses. Here, sequences must align to target features (like genes or non-coding RNAs) and related sequences with different compositions are counted into the same feature. Consequently, sequence integrity is lost, makin...

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Bibliographic Details
Main Authors: Kugelberg, U. (Author), Nätt, D. (Author), Örkenby, L. (Author), Öst, A. (Author), Skog, S. (Author)
Format: Article
Language:English
Published: Oxford University Press 2023
Online Access:View Fulltext in Publisher
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