The influence of allosteric activation on the active site properties of phenylalanine hydroxylase

Phenylalanine Hydroxylase (PheH, EC: 1.14.16.1) is a non-heme iron monooxygenase that converts L-Phe to L-Tyr using a tetrahydrobiopterin coenzyme and dioxygen. PheH is allosterically regulated by its substrate L-Phe. Binding of L-Phe to the allosteric site causes PheH to convert from a low-activity...

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Main Author: Nolan, Douglas
Other Authors: Caradonna, John P.
Language:en_US
Published: 2021
Subjects:
Online Access:https://hdl.handle.net/2144/42023
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spelling ndltd-bu.edu-oai-open.bu.edu-2144-420232021-02-13T05:01:16Z The influence of allosteric activation on the active site properties of phenylalanine hydroxylase Nolan, Douglas Caradonna, John P. Biochemistry Phenylalanine Hydroxylase (PheH, EC: 1.14.16.1) is a non-heme iron monooxygenase that converts L-Phe to L-Tyr using a tetrahydrobiopterin coenzyme and dioxygen. PheH is allosterically regulated by its substrate L-Phe. Binding of L-Phe to the allosteric site causes PheH to convert from a low-activity T-state to a high-activity R-state. Upon the T to R conversion, PheH experiences an increase in hydrophobicity, a shift in fluorescence emission peak maximum, increased hydrodynamic radius, and elongation of its quaternary structure. While PheH has been well characterized in terms of these global changes that occur upon allosteric activation, less is known about how the active site properties change upon this process. Herein, we report the use of cw-EPR and pulsed-EPR techniques (electron spin echo envelope modulation (ESEEM) and hyperfine sublevel correlation (HYSCORE) methods) to probe the properties of the active site of PheH with respect to the primary coordination sphere of the non-heme iron center and the orientation of pterin coenzyme and substrate L-Phe. A suit of cw-EPR experiments using 17O enriched water and 1H-HYSCORE approaches were used to probe the water coordination of the iron center across mechanistic states of PheH and select mutants. The ESEEM technique was combined with 2H labelled L-Phe and H4pterin coenzyme to examine how the binding orientation of both L-Phe and H4pterin change upon allosteric activation. These results demonstrate that L-Phe allosteric activation causes the pterin coenzyme to move ~1.8 Å closer to the iron center. Furthermore, 2H-ESEEM samples prepared at non-activating concentrations of L-Phe suggest that its binding in the active site alone is not sufficient to induce the movement of the pterin coenzyme. 2H-ESEEM studies using site specifically deuterated L-Phe demonstrate that allosteric activation and binding of pterin cause the reorientation of L-Phe such that both the meta and ortho positions are similarly close to the iron center. Lastly, steady state kinetic measurements of pterin oxidation within the active site of apo-wtPheH and apo-PheH118-452 were measured to understand how the active site influences the reactivity of pterin with O2. These results will be explained in the context of the regulatory properties of PheH as well as the catalytic mechanism. 2021-02-11T15:54:19Z 2021-02-11T15:54:19Z 2020 2021-02-10T17:02:00Z Thesis/Dissertation https://hdl.handle.net/2144/42023 0000-0003-1420-8518 en_US
collection NDLTD
language en_US
sources NDLTD
topic Biochemistry
spellingShingle Biochemistry
Nolan, Douglas
The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
description Phenylalanine Hydroxylase (PheH, EC: 1.14.16.1) is a non-heme iron monooxygenase that converts L-Phe to L-Tyr using a tetrahydrobiopterin coenzyme and dioxygen. PheH is allosterically regulated by its substrate L-Phe. Binding of L-Phe to the allosteric site causes PheH to convert from a low-activity T-state to a high-activity R-state. Upon the T to R conversion, PheH experiences an increase in hydrophobicity, a shift in fluorescence emission peak maximum, increased hydrodynamic radius, and elongation of its quaternary structure. While PheH has been well characterized in terms of these global changes that occur upon allosteric activation, less is known about how the active site properties change upon this process. Herein, we report the use of cw-EPR and pulsed-EPR techniques (electron spin echo envelope modulation (ESEEM) and hyperfine sublevel correlation (HYSCORE) methods) to probe the properties of the active site of PheH with respect to the primary coordination sphere of the non-heme iron center and the orientation of pterin coenzyme and substrate L-Phe. A suit of cw-EPR experiments using 17O enriched water and 1H-HYSCORE approaches were used to probe the water coordination of the iron center across mechanistic states of PheH and select mutants. The ESEEM technique was combined with 2H labelled L-Phe and H4pterin coenzyme to examine how the binding orientation of both L-Phe and H4pterin change upon allosteric activation. These results demonstrate that L-Phe allosteric activation causes the pterin coenzyme to move ~1.8 Å closer to the iron center. Furthermore, 2H-ESEEM samples prepared at non-activating concentrations of L-Phe suggest that its binding in the active site alone is not sufficient to induce the movement of the pterin coenzyme. 2H-ESEEM studies using site specifically deuterated L-Phe demonstrate that allosteric activation and binding of pterin cause the reorientation of L-Phe such that both the meta and ortho positions are similarly close to the iron center. Lastly, steady state kinetic measurements of pterin oxidation within the active site of apo-wtPheH and apo-PheH118-452 were measured to understand how the active site influences the reactivity of pterin with O2. These results will be explained in the context of the regulatory properties of PheH as well as the catalytic mechanism.
author2 Caradonna, John P.
author_facet Caradonna, John P.
Nolan, Douglas
author Nolan, Douglas
author_sort Nolan, Douglas
title The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
title_short The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
title_full The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
title_fullStr The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
title_full_unstemmed The influence of allosteric activation on the active site properties of phenylalanine hydroxylase
title_sort influence of allosteric activation on the active site properties of phenylalanine hydroxylase
publishDate 2021
url https://hdl.handle.net/2144/42023
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