Development and application of chemical robotics to formulation, synthesis and discovery

The use of algorithms and automation to do chemistry and formulation have the potential to speed up discovery. In this thesis, a series of new approaches are explored. First, a genetic algorithm was employed as an evolutionary algorithm, with its mono-objective and multi-objective variant to optimis...

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Main Author: Hosni, Zied
Published: University of Glasgow 2017
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Online Access:https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.724005
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spelling ndltd-bl.uk-oai-ethos.bl.uk-7240052019-03-05T15:49:33ZDevelopment and application of chemical robotics to formulation, synthesis and discoveryHosni, Zied2017The use of algorithms and automation to do chemistry and formulation have the potential to speed up discovery. In this thesis, a series of new approaches are explored. First, a genetic algorithm was employed as an evolutionary algorithm, with its mono-objective and multi-objective variant to optimise viscous formulations. An autonomous platform was designed to mix and stir multiple ingredients that are liquid and solid at room temperature. Viscosity, pH and opacity of mixtures are analysed and then used as input for the evolutionary algorithm, which designs the consecutive experiments according to the fitness gathered for each formulation. This procedure is repeated in a closed loop until the overall fitness of the optimisation reaches an optimum result and finds a compromise with respect to the targeted physical properties. Secondly, a multifunctional automated platform was built to perform a set of reactions involving the formation of molybdenum blue nanoclusters. The crystallisation and further analysis were automated. In addition, the rig was used to test the ability to keep a solution of polyoxometalates at a stable redox potential during the addition of various oxidants and reductants. The fuzzy logic controller was employed to stat the redox potential of the solution under equilibrium and non-equilibrium regimes. Finally, the platform was used to apply modified redox oscillations on the polyoxometalates with the aim of forming and breaking novel building blocks that are hard to isolate in a traditional batch reaction. Thirdly, the same fuzzy logic approach was used, which is far from equilibrium a system of organic macrocycles of different sizes. The hypothesis for this approach is to be able to track the emergence of novel structures like the stacking of the macrocycles and the formation of nanowires of different lengths. Experimentally, an oxidant and a reducing agent were added to dithiol solution enabling the formation and the destruction of organic macrocycles with different sizes. The reaction was followed using an online UV-Vis dip probe and online HPLC. The dynamics of this system under non-equilibrium conditions enabling the detection of emergent species (macrocycles with different sizes, beta sheets from the stacking of the macrocycles to form nanowires with different lengths) that are undetectable under an equilibrium. Finally, three nature-inspired metaheuristics were implemented in LabVIEW: The Fireflies-levy flight's algorithm, the Cuckoo search and the Tabu search were tested with multimodal multidimensional functions. The validation of the algorithms was performed on mainly two nonlinear chemical systems. These metaheuristics showed very good performance to detect the optimum solutions at high and low resolutions. The Brute Force was used as the control algorithm to ensure the detection of the best solution. The highest frequency of the Belousov-Zhabotinsky reaction was tracked through these optimisations.006.3QD ChemistryUniversity of Glasgowhttps://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.724005http://theses.gla.ac.uk/8345/Electronic Thesis or Dissertation
collection NDLTD
sources NDLTD
topic 006.3
QD Chemistry
spellingShingle 006.3
QD Chemistry
Hosni, Zied
Development and application of chemical robotics to formulation, synthesis and discovery
description The use of algorithms and automation to do chemistry and formulation have the potential to speed up discovery. In this thesis, a series of new approaches are explored. First, a genetic algorithm was employed as an evolutionary algorithm, with its mono-objective and multi-objective variant to optimise viscous formulations. An autonomous platform was designed to mix and stir multiple ingredients that are liquid and solid at room temperature. Viscosity, pH and opacity of mixtures are analysed and then used as input for the evolutionary algorithm, which designs the consecutive experiments according to the fitness gathered for each formulation. This procedure is repeated in a closed loop until the overall fitness of the optimisation reaches an optimum result and finds a compromise with respect to the targeted physical properties. Secondly, a multifunctional automated platform was built to perform a set of reactions involving the formation of molybdenum blue nanoclusters. The crystallisation and further analysis were automated. In addition, the rig was used to test the ability to keep a solution of polyoxometalates at a stable redox potential during the addition of various oxidants and reductants. The fuzzy logic controller was employed to stat the redox potential of the solution under equilibrium and non-equilibrium regimes. Finally, the platform was used to apply modified redox oscillations on the polyoxometalates with the aim of forming and breaking novel building blocks that are hard to isolate in a traditional batch reaction. Thirdly, the same fuzzy logic approach was used, which is far from equilibrium a system of organic macrocycles of different sizes. The hypothesis for this approach is to be able to track the emergence of novel structures like the stacking of the macrocycles and the formation of nanowires of different lengths. Experimentally, an oxidant and a reducing agent were added to dithiol solution enabling the formation and the destruction of organic macrocycles with different sizes. The reaction was followed using an online UV-Vis dip probe and online HPLC. The dynamics of this system under non-equilibrium conditions enabling the detection of emergent species (macrocycles with different sizes, beta sheets from the stacking of the macrocycles to form nanowires with different lengths) that are undetectable under an equilibrium. Finally, three nature-inspired metaheuristics were implemented in LabVIEW: The Fireflies-levy flight's algorithm, the Cuckoo search and the Tabu search were tested with multimodal multidimensional functions. The validation of the algorithms was performed on mainly two nonlinear chemical systems. These metaheuristics showed very good performance to detect the optimum solutions at high and low resolutions. The Brute Force was used as the control algorithm to ensure the detection of the best solution. The highest frequency of the Belousov-Zhabotinsky reaction was tracked through these optimisations.
author Hosni, Zied
author_facet Hosni, Zied
author_sort Hosni, Zied
title Development and application of chemical robotics to formulation, synthesis and discovery
title_short Development and application of chemical robotics to formulation, synthesis and discovery
title_full Development and application of chemical robotics to formulation, synthesis and discovery
title_fullStr Development and application of chemical robotics to formulation, synthesis and discovery
title_full_unstemmed Development and application of chemical robotics to formulation, synthesis and discovery
title_sort development and application of chemical robotics to formulation, synthesis and discovery
publisher University of Glasgow
publishDate 2017
url https://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.724005
work_keys_str_mv AT hosnizied developmentandapplicationofchemicalroboticstoformulationsynthesisanddiscovery
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