Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium

Successful childbirth depends on precisely coordinated uterine contractions during labour. Calcium indicator fluorescence imaging is one of the main techniques for investigating the mechanisms governing this physiological process and its pathologies. The effective spatiotemporal resolution of calciu...

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Main Author: Loftus, Fiona C.
Published: University of Warwick 2015
Subjects:
Online Access:http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.685200
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spelling ndltd-bl.uk-oai-ethos.bl.uk-6852002017-08-30T03:15:05ZFine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometriumLoftus, Fiona C.2015Successful childbirth depends on precisely coordinated uterine contractions during labour. Calcium indicator fluorescence imaging is one of the main techniques for investigating the mechanisms governing this physiological process and its pathologies. The effective spatiotemporal resolution of calcium signals is, however, limited by the motion of contracting tissue: structures of interest that are of the order of microns can move over a hundred times their width during a contraction. The simultaneous changes in local intensity and tissue configuration make motion tracking a nontrivial image-analysis problem and confound many of the standard techniques. In this thesis I present a method that tracks local motion throughout the tissue allowing for an almost complete removal of motion artifacts. This provides a stabilised calcium signal down to a pixel resolution which, for the data examined, is of the order of a few microns. As a byproduct of the image stabilisation, a complete kinematic description of the contraction-relaxation cycles is also obtained containing novel information about the mechanical response of the tissue, such as the identification of a characteristic length scale, of the order of 40-50 microns, below which tissue motion is homogeneous. This kinematic information will help to fill the gaps in experimentally recorded mechanical properties of contracting myometrium. Applying the algorithm to over twenty datasets, I show that for the first time unrestricted single-cell calcium measurements can be taken from myometrial tissue slices over multiple contraction-relaxation cycles. I investigate single-cell calcium signals in between contractions and compare single-cell calcium dynamics in control and oxytocin-treated myometrium. Additionally, I use the kinematics of tissue motion to compare calcium signals at the subcellular level and local contractile motion. Freely modifiable code written in the MATLAB environment was published under the GNU General Public license in the hope that it will be useful to researchers analysing these or similar datasets.618.4QP PhysiologyUniversity of Warwickhttp://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.685200http://wrap.warwick.ac.uk/78997/Electronic Thesis or Dissertation
collection NDLTD
sources NDLTD
topic 618.4
QP Physiology
spellingShingle 618.4
QP Physiology
Loftus, Fiona C.
Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
description Successful childbirth depends on precisely coordinated uterine contractions during labour. Calcium indicator fluorescence imaging is one of the main techniques for investigating the mechanisms governing this physiological process and its pathologies. The effective spatiotemporal resolution of calcium signals is, however, limited by the motion of contracting tissue: structures of interest that are of the order of microns can move over a hundred times their width during a contraction. The simultaneous changes in local intensity and tissue configuration make motion tracking a nontrivial image-analysis problem and confound many of the standard techniques. In this thesis I present a method that tracks local motion throughout the tissue allowing for an almost complete removal of motion artifacts. This provides a stabilised calcium signal down to a pixel resolution which, for the data examined, is of the order of a few microns. As a byproduct of the image stabilisation, a complete kinematic description of the contraction-relaxation cycles is also obtained containing novel information about the mechanical response of the tissue, such as the identification of a characteristic length scale, of the order of 40-50 microns, below which tissue motion is homogeneous. This kinematic information will help to fill the gaps in experimentally recorded mechanical properties of contracting myometrium. Applying the algorithm to over twenty datasets, I show that for the first time unrestricted single-cell calcium measurements can be taken from myometrial tissue slices over multiple contraction-relaxation cycles. I investigate single-cell calcium signals in between contractions and compare single-cell calcium dynamics in control and oxytocin-treated myometrium. Additionally, I use the kinematics of tissue motion to compare calcium signals at the subcellular level and local contractile motion. Freely modifiable code written in the MATLAB environment was published under the GNU General Public license in the hope that it will be useful to researchers analysing these or similar datasets.
author Loftus, Fiona C.
author_facet Loftus, Fiona C.
author_sort Loftus, Fiona C.
title Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
title_short Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
title_full Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
title_fullStr Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
title_full_unstemmed Fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
title_sort fine spatiotemporal calcium signals and kinematic properties revealed by motion-corrected calcium images of contracting myometrium
publisher University of Warwick
publishDate 2015
url http://ethos.bl.uk/OrderDetails.do?uin=uk.bl.ethos.685200
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