A Machine-Learning Approach to Measuring Tumor pH Using MRI

Tumor pH can become an important consideration in diagnosis and choosing an effective therapy. Measuring pH currently requires invasive procedures or has problems with sensitivity. Previous methods for the measurement of pH by MRI are dependent on knowing the concentration of contrast agents or a...

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Main Authors: DeGrandchamp, Joseph B., Cárdenas-Rodríguez, Julio
Language:en_US
Published: The University of Arizona. 2017
Online Access:http://hdl.handle.net/10150/624957
http://arizona.openrepository.com/arizona/handle/10150/624957
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spelling ndltd-arizona.edu-oai-arizona.openrepository.com-10150-6249572017-07-29T03:00:39Z A Machine-Learning Approach to Measuring Tumor pH Using MRI DeGrandchamp, Joseph B. Cárdenas-Rodríguez, Julio DeGrandchamp, Joseph B. Cárdenas-Rodríguez, Julio Cárdenas-Rodríguez, Julio Tumor pH can become an important consideration in diagnosis and choosing an effective therapy. Measuring pH currently requires invasive procedures or has problems with sensitivity. Previous methods for the measurement of pH by MRI are dependent on knowing the concentration of contrast agents or are useful at a limited pH range. Determining the concentration of a contrast agent in vivo is a very difficult task. We propose to use machine learning to decouple the estimation of pH from requiring knowledge of contrast agent concentration. This approach makes it possible to use new contrast agents and extends the ranges of pH than can be studied. In addition, this technique uses the entirety of the data instead of fitting parameters in order to make pH predictions. We evaluated the performance of this new method to measure pH by repurposing a clinically approved X-ray contrast agent, ioxilan, as an MRI agent. The pH was successfully measured in vitro with a small margin of error (RMSE = 0.0515), and the method was able to produce reliable parametric maps of pH for acquired image sets. We will extend this new method to measure pH in mouse models of cancer. 2017 text Electronic Thesis http://hdl.handle.net/10150/624957 http://arizona.openrepository.com/arizona/handle/10150/624957 en_US Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. The University of Arizona.
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language en_US
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description Tumor pH can become an important consideration in diagnosis and choosing an effective therapy. Measuring pH currently requires invasive procedures or has problems with sensitivity. Previous methods for the measurement of pH by MRI are dependent on knowing the concentration of contrast agents or are useful at a limited pH range. Determining the concentration of a contrast agent in vivo is a very difficult task. We propose to use machine learning to decouple the estimation of pH from requiring knowledge of contrast agent concentration. This approach makes it possible to use new contrast agents and extends the ranges of pH than can be studied. In addition, this technique uses the entirety of the data instead of fitting parameters in order to make pH predictions. We evaluated the performance of this new method to measure pH by repurposing a clinically approved X-ray contrast agent, ioxilan, as an MRI agent. The pH was successfully measured in vitro with a small margin of error (RMSE = 0.0515), and the method was able to produce reliable parametric maps of pH for acquired image sets. We will extend this new method to measure pH in mouse models of cancer.
author2 Cárdenas-Rodríguez, Julio
author_facet Cárdenas-Rodríguez, Julio
DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
author DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
spellingShingle DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
DeGrandchamp, Joseph B.
Cárdenas-Rodríguez, Julio
A Machine-Learning Approach to Measuring Tumor pH Using MRI
author_sort DeGrandchamp, Joseph B.
title A Machine-Learning Approach to Measuring Tumor pH Using MRI
title_short A Machine-Learning Approach to Measuring Tumor pH Using MRI
title_full A Machine-Learning Approach to Measuring Tumor pH Using MRI
title_fullStr A Machine-Learning Approach to Measuring Tumor pH Using MRI
title_full_unstemmed A Machine-Learning Approach to Measuring Tumor pH Using MRI
title_sort machine-learning approach to measuring tumor ph using mri
publisher The University of Arizona.
publishDate 2017
url http://hdl.handle.net/10150/624957
http://arizona.openrepository.com/arizona/handle/10150/624957
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