VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements

VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements

Background: The genes that produce antibodies and the immune receptors expressed on lymphocytes are not germline encoded; rather, they are somatically generated in each developing lymphocyte by a process called V(D) J recombination, which assembles specific, independent gene segments into mature com...

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Bibliographic Details
Main Authors: Toby, Inimary T., Levin, Mikhail K., Salinas, Edward A., Christley, Scott, Bhattacharya, Sanchita, Breden, Felix, Buntzman, Adam, Corrie, Brian, Fonner, John, Gupta, Namita T., Hershberg, Uri, Marthandan, Nishanth, Rosenfeld, Aaron, Rounds, William, Rubelt, Florian, Scarborough, Walter, Scott, Jamie K., Uduman, Mohamed, Vander Heiden, Jason A., Scheuermann, Richard H., Monson, Nancy, Kleinstein, Steven H., Cowell, Lindsay G.
Other Authors: Univ Arizona, Sch Med, Dept Immunobiol
Language:en
Published: BIOMED CENTRAL LTD 2016
Subjects:
Repertoire profiling
Immune repertoire
Antigen receptor repertoire
Data standards
Data sharing
Python
C plus
XML
Online Access:http://hdl.handle.net/10150/624652
http://arizona.openrepository.com/arizona/handle/10150/624652

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