Screening synteny blocks in pairwise genome comparisons through integer programming

Screening synteny blocks in pairwise genome comparisons through integer programming

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BACKGROUND:It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have repeatedly experienced whole genome duplication (WGD) eve...

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Bibliographic Details
Main Authors: Tang, Haibao, Lyons, Eric, Pedersen, Brent, Schnable, James, Paterson, Andrew, Freeling, Michael
Other Authors: Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720, USA
Language:en
Published: BioMed Central 2011
Online Access:Tang et al. BMC Bioinformatics 2011, 12:102 http://www.biomedcentral.com/1471-2105/12/102
http://hdl.handle.net/10150/610221
http://arizona.openrepository.com/arizona/handle/10150/610221

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