Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI
The diffusion tensor model is non-specific in regions where micrometer structural patterns are inconsistent at the millimeter scale (i.e., brain regions with pathways that cross, bend, branch, fan, etc.). Numerous models have been proposed to represent crossing fibers and complex intra-voxel structu...
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ndltd-VANDERBILT-oai-VANDERBILTETD-etd-03312017-1041412017-04-06T05:39:59Z Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI Nath, Vishwesh Computer Science The diffusion tensor model is non-specific in regions where micrometer structural patterns are inconsistent at the millimeter scale (i.e., brain regions with pathways that cross, bend, branch, fan, etc.). Numerous models have been proposed to represent crossing fibers and complex intra-voxel structure from in vivo diffusion weighted magnetic resonance imaging (e.g., high angular resolution diffusion imaging â HARDI). Here, we present an empirical comparison of two HARDI approaches â persistent angular structure MRI (PAS-MRI) and Q-ball â using a newly acquired reproducibility dataset. Briefly, a single subject was scanned 11 times with 96 diffusion weighted directions and 10 reference volumes for each of two b-values (1000 and 3000 s/mm2 for a total of 2144 volumes). Empirical reproducibility of intra-voxel fiber fractions (number/strength of peaks), angular orientation, and fractional anisotropy was compared with metrics from a traditional tensor analysis approach, focusing on b-values of 1000 s/mm2 and 3000 s/mm2. PAS-MRI is shown to be more reproducible than Q-ball and offers advantages at low b-values. However, there are substantial and biologically meaningful differences between the intra-voxel structures estimated both in terms of analysis method as well as by b-value. Hence, it is premature to perform meta-analysis or combine results across HARDI studies using different analysis model or acquisition sequences. Dr.Bennett A. Landman Dr. Richard A. Peters VANDERBILT 2017-04-05 text application/pdf http://etd.library.vanderbilt.edu/available/etd-03312017-104141/ http://etd.library.vanderbilt.edu/available/etd-03312017-104141/ en restricted I hereby certify that, if appropriate, I have obtained and attached hereto a written permission statement from the owner(s) of each third party copyrighted matter to be included in my thesis, dissertation, or project report, allowing distribution as specified below. I certify that the version I submitted is the same as that approved by my advisory committee. I hereby grant to Vanderbilt University or its agents the non-exclusive license to archive and make accessible, under the conditions specified below, my thesis, dissertation, or project report in whole or in part in all forms of media, now or hereafter known. I retain all other ownership rights to the copyright of the thesis, dissertation or project report. I also retain the right to use in future works (such as articles or books) all or part of this thesis, dissertation, or project report. |
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Computer Science Nath, Vishwesh Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
description |
The diffusion tensor model is non-specific in regions where micrometer structural patterns are inconsistent at the millimeter scale (i.e., brain regions with pathways that cross, bend, branch, fan, etc.). Numerous models have been proposed to represent crossing fibers and complex intra-voxel structure from in vivo diffusion weighted magnetic resonance imaging (e.g., high angular resolution diffusion imaging â HARDI). Here, we present an empirical comparison of two HARDI approaches â persistent angular structure MRI (PAS-MRI) and Q-ball â using a newly acquired reproducibility dataset. Briefly, a single subject was scanned 11 times with 96 diffusion weighted directions and 10 reference volumes for each of two b-values (1000 and 3000 s/mm2 for a total of 2144 volumes). Empirical reproducibility of intra-voxel fiber fractions (number/strength of peaks), angular orientation, and fractional anisotropy was compared with metrics from a traditional tensor analysis approach, focusing on b-values of 1000 s/mm2 and 3000 s/mm2. PAS-MRI is shown to be more reproducible than Q-ball and offers advantages at low b-values. However, there are substantial and biologically meaningful differences between the intra-voxel structures estimated both in terms of analysis method as well as by b-value. Hence, it is premature to perform meta-analysis or combine results across HARDI studies using different analysis model or acquisition sequences. |
author2 |
Dr.Bennett A. Landman |
author_facet |
Dr.Bennett A. Landman Nath, Vishwesh |
author |
Nath, Vishwesh |
author_sort |
Nath, Vishwesh |
title |
Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
title_short |
Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
title_full |
Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
title_fullStr |
Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
title_full_unstemmed |
Empirical Estimation of Intra-Voxel Structure with Persistent Angular Structure and Q-ball Models of Diffusion Weighted MRI |
title_sort |
empirical estimation of intra-voxel structure with persistent angular structure and q-ball models of diffusion weighted mri |
publisher |
VANDERBILT |
publishDate |
2017 |
url |
http://etd.library.vanderbilt.edu/available/etd-03312017-104141/ |
work_keys_str_mv |
AT nathvishwesh empiricalestimationofintravoxelstructurewithpersistentangularstructureandqballmodelsofdiffusionweightedmri |
_version_ |
1718436480029818880 |