Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics

In this dissertation, three different microfluidic devices with bioanalytical applications are presented. From chapter to chapter, the bioanalytical focus will gradually become the development of a point-of-care sensor platform able to yield a reliable and quantitative response in the presence of th...

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Main Author: Scida, Karen
Format: Others
Language:en
Published: 2015
Subjects:
DNA
Online Access:http://hdl.handle.net/2152/28339
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spelling ndltd-UTEXAS-oai-repositories.lib.utexas.edu-2152-283392015-09-20T17:29:24ZMicrofluidics for bioanalytical research : transitioning into point-of-care diagnosticsScida, KarenMicrofluidicsPoint-of-careBioanalyticalSensorPaper analytical devicesImmunoassayElectrochemistryFluorescenceBipolar electrochemistryBipolar electrodeDNABoolean logic gatesSilver nanoparticleMagnetic microbeadIn this dissertation, three different microfluidic devices with bioanalytical applications are presented. From chapter to chapter, the bioanalytical focus will gradually become the development of a point-of-care sensor platform able to yield a reliable and quantitative response in the presence of the desired target. The first device consists of photolithographically-patterned gold on glass bipolar electrodes and PDMS Y-shaped microchannels for the controlled enrichment, separation from a mixture, and delivery of two charged dyes into separate receiving microchannels. The principle for the permanent separation of these dyes is based on the concept of bipolar electrochemistry and depended on the balancing/unbalancing of convective and electromigrating forces caused by the application of a potential bias, as well as the activation/deactivation of the bipolar electrodes. Two different bipolar electrode configurations are described and fluorescence is used to optimize their efficiency, speed, and cleanliness of delivery. The second device is a DNA sensor fabricated on paper by wax printing and folding to form 3D channels. DNA is detected by strand-displacement induced fluorescence of a single-stranded DNA. A multiplexed version of this sensor is also shown where the experiment results in “OR” and “AND” Boolean logic gate operations. In addition, the nonspecific adsorption of the reagents to cellulose is studied, demonstrating that significant reduction of nonspecific adsorption and increased sensitivity can be achieved by pre-treating the substrate with bovine serum albumin and by preparing all analyte solutions with spectator DNA. The third device, also made of paper, has a novel design and uses a versatile electrochemical detection method for the indirect detection of analytes via the direct detection of AgNP labels. A proof-of-concept experiment is shown where streptavidin-coated magnetic microbeads and biotin-coated AgNPs are used to form a composite model analyte. The paper device, called oSlip, and electrochemical method used are easily coupled so the resulting sensor has a simple user-device interface. LODs of 767 fM are achieved while retaining high reproducibility and efficiency. The fourth device is the updated version of the oSlip. In this case, the objective is to show the current progress and limitations in the detection of real analytes using the oSlip device. A sandwich-type immunoassay approach is used to detect human chorionic gonadotrophin (pregnancy hormone) present in human urine. Various optimization steps are performed to obtain the ideal reagent concentrations and incubation time necessary to form the immunocomposite in one step, that is, by mixing all reagents at the same time in the oSlip. Additionally, improvements to the electrochemical detection step are demonstrated.text2015-02-09T14:27:36Z2014-122015-01-28December 20142015-02-09T14:27:37ZThesisapplication/pdfhttp://hdl.handle.net/2152/28339en
collection NDLTD
language en
format Others
sources NDLTD
topic Microfluidics
Point-of-care
Bioanalytical
Sensor
Paper analytical devices
Immunoassay
Electrochemistry
Fluorescence
Bipolar electrochemistry
Bipolar electrode
DNA
Boolean logic gates
Silver nanoparticle
Magnetic microbead
spellingShingle Microfluidics
Point-of-care
Bioanalytical
Sensor
Paper analytical devices
Immunoassay
Electrochemistry
Fluorescence
Bipolar electrochemistry
Bipolar electrode
DNA
Boolean logic gates
Silver nanoparticle
Magnetic microbead
Scida, Karen
Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
description In this dissertation, three different microfluidic devices with bioanalytical applications are presented. From chapter to chapter, the bioanalytical focus will gradually become the development of a point-of-care sensor platform able to yield a reliable and quantitative response in the presence of the desired target. The first device consists of photolithographically-patterned gold on glass bipolar electrodes and PDMS Y-shaped microchannels for the controlled enrichment, separation from a mixture, and delivery of two charged dyes into separate receiving microchannels. The principle for the permanent separation of these dyes is based on the concept of bipolar electrochemistry and depended on the balancing/unbalancing of convective and electromigrating forces caused by the application of a potential bias, as well as the activation/deactivation of the bipolar electrodes. Two different bipolar electrode configurations are described and fluorescence is used to optimize their efficiency, speed, and cleanliness of delivery. The second device is a DNA sensor fabricated on paper by wax printing and folding to form 3D channels. DNA is detected by strand-displacement induced fluorescence of a single-stranded DNA. A multiplexed version of this sensor is also shown where the experiment results in “OR” and “AND” Boolean logic gate operations. In addition, the nonspecific adsorption of the reagents to cellulose is studied, demonstrating that significant reduction of nonspecific adsorption and increased sensitivity can be achieved by pre-treating the substrate with bovine serum albumin and by preparing all analyte solutions with spectator DNA. The third device, also made of paper, has a novel design and uses a versatile electrochemical detection method for the indirect detection of analytes via the direct detection of AgNP labels. A proof-of-concept experiment is shown where streptavidin-coated magnetic microbeads and biotin-coated AgNPs are used to form a composite model analyte. The paper device, called oSlip, and electrochemical method used are easily coupled so the resulting sensor has a simple user-device interface. LODs of 767 fM are achieved while retaining high reproducibility and efficiency. The fourth device is the updated version of the oSlip. In this case, the objective is to show the current progress and limitations in the detection of real analytes using the oSlip device. A sandwich-type immunoassay approach is used to detect human chorionic gonadotrophin (pregnancy hormone) present in human urine. Various optimization steps are performed to obtain the ideal reagent concentrations and incubation time necessary to form the immunocomposite in one step, that is, by mixing all reagents at the same time in the oSlip. Additionally, improvements to the electrochemical detection step are demonstrated. === text
author Scida, Karen
author_facet Scida, Karen
author_sort Scida, Karen
title Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
title_short Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
title_full Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
title_fullStr Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
title_full_unstemmed Microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
title_sort microfluidics for bioanalytical research : transitioning into point-of-care diagnostics
publishDate 2015
url http://hdl.handle.net/2152/28339
work_keys_str_mv AT scidakaren microfluidicsforbioanalyticalresearchtransitioningintopointofcarediagnostics
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