Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels

This thesis deals with phylogenetic relationships at different taxonomic levels. All the plants studied are or have been included in the order Gentianales, which comprises about 17 200 species. The phylogenies are based on parsimony analyses of nucleotide sequence data (DNA) from different regions i...

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Bibliographic Details
Main Author: Backlund, Maria
Format: Doctoral Thesis
Language:English
Published: Uppsala universitet, Systematisk botanik 2005
Subjects:
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-6124
http://nbn-resolving.de/urn:isbn:91-554-6393-2
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spelling ndltd-UPSALLA1-oai-DiVA.org-uu-61242013-01-08T13:05:02ZPhylogenetic Studies in the Gentianales – Approaches at Different Taxonomic LevelsengBacklund, MariaUppsala universitet, Systematisk botanikUppsala : Acta Universitatis Upsaliensis2005BiologyGentianalesphylogenyclassificationrbcLtrnT-Frps16ndhF ndhPaederieaePutorieaeRubiaceaeLoganiaceaeBuddlejaceaeGelsemiaceaeApocynaceaeGentianaceaeBiologiBiologyBiologiThis thesis deals with phylogenetic relationships at different taxonomic levels. All the plants studied are or have been included in the order Gentianales, which comprises about 17 200 species. The phylogenies are based on parsimony analyses of nucleotide sequence data (DNA) from different regions in the chloroplast genome, but morphological characteristics have also been studied. Analyses of sequence data from the genes rbcL and ndhF provide the interfamilial structure of the order Gentianales, shown to comprise the families Apocynaceae (incl. Asclepiadaceae), Gelsemiaceae, Gentianaceae, Loganiaceae, and Rubiaceae. Exclusion of certain genera from the Loganiaceae is confirmed and their phylogenetic positions are clarified. Some of these genera remain within the Gentianales, while others belong to other orders. Exclusion of the tribe Buddlejeae from the Loganiaceae is confirmed, and a monophyletic group formed by Buddleja, Emorya, Gomphostigma, and Nicodemia is recognized and placed in the Lamiales. The Loganiaceae s.str. forms, after these exclusions, a strongly supported monophyletic group comprising 13 genera. The tribe Paederieae in the family Rubiaceae is analysed using sequence data from the regions rbcL gene, rps16 intron, and the regions trnT-F, and is shown to be paraphyletic. These results lead to a new circumscription of Paederieae comprising the genera Leptodermis, Paederia, Serissa, and Spermadictyon. The tribe Putorieae is reestablished with the single genus Plocama, including 34 species. Aitchisonia, Choulettia, Crocyllis, Gaillonia, Jaubertia, Pseudogaillonia, Pterogaillonia, and Putoria are reduced to synonyms of Plocama based on the molecular analyses and morphological studies. The Mediterranean species of the re-circumscribed Plocama, previously segregated as the genus Putoria, are revised. Two species, Plocama calabrica and P. brevifolia, are recognized, their synonymics are established, and seven lectotypes are selected. Doctoral thesis, comprehensive summaryinfo:eu-repo/semantics/doctoralThesistexthttp://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-6124urn:isbn:91-554-6393-2Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology, 1651-6214 ; 117application/pdfinfo:eu-repo/semantics/openAccess
collection NDLTD
language English
format Doctoral Thesis
sources NDLTD
topic Biology
Gentianales
phylogeny
classification
rbcL
trnT-F
rps16
ndhF ndh
Paederieae
Putorieae
Rubiaceae
Loganiaceae
Buddlejaceae
Gelsemiaceae
Apocynaceae
Gentianaceae
Biologi
Biology
Biologi
spellingShingle Biology
Gentianales
phylogeny
classification
rbcL
trnT-F
rps16
ndhF ndh
Paederieae
Putorieae
Rubiaceae
Loganiaceae
Buddlejaceae
Gelsemiaceae
Apocynaceae
Gentianaceae
Biologi
Biology
Biologi
Backlund, Maria
Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
description This thesis deals with phylogenetic relationships at different taxonomic levels. All the plants studied are or have been included in the order Gentianales, which comprises about 17 200 species. The phylogenies are based on parsimony analyses of nucleotide sequence data (DNA) from different regions in the chloroplast genome, but morphological characteristics have also been studied. Analyses of sequence data from the genes rbcL and ndhF provide the interfamilial structure of the order Gentianales, shown to comprise the families Apocynaceae (incl. Asclepiadaceae), Gelsemiaceae, Gentianaceae, Loganiaceae, and Rubiaceae. Exclusion of certain genera from the Loganiaceae is confirmed and their phylogenetic positions are clarified. Some of these genera remain within the Gentianales, while others belong to other orders. Exclusion of the tribe Buddlejeae from the Loganiaceae is confirmed, and a monophyletic group formed by Buddleja, Emorya, Gomphostigma, and Nicodemia is recognized and placed in the Lamiales. The Loganiaceae s.str. forms, after these exclusions, a strongly supported monophyletic group comprising 13 genera. The tribe Paederieae in the family Rubiaceae is analysed using sequence data from the regions rbcL gene, rps16 intron, and the regions trnT-F, and is shown to be paraphyletic. These results lead to a new circumscription of Paederieae comprising the genera Leptodermis, Paederia, Serissa, and Spermadictyon. The tribe Putorieae is reestablished with the single genus Plocama, including 34 species. Aitchisonia, Choulettia, Crocyllis, Gaillonia, Jaubertia, Pseudogaillonia, Pterogaillonia, and Putoria are reduced to synonyms of Plocama based on the molecular analyses and morphological studies. The Mediterranean species of the re-circumscribed Plocama, previously segregated as the genus Putoria, are revised. Two species, Plocama calabrica and P. brevifolia, are recognized, their synonymics are established, and seven lectotypes are selected.
author Backlund, Maria
author_facet Backlund, Maria
author_sort Backlund, Maria
title Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
title_short Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
title_full Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
title_fullStr Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
title_full_unstemmed Phylogenetic Studies in the Gentianales – Approaches at Different Taxonomic Levels
title_sort phylogenetic studies in the gentianales – approaches at different taxonomic levels
publisher Uppsala universitet, Systematisk botanik
publishDate 2005
url http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-6124
http://nbn-resolving.de/urn:isbn:91-554-6393-2
work_keys_str_mv AT backlundmaria phylogeneticstudiesinthegentianalesapproachesatdifferenttaxonomiclevels
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