Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD
Water is “the matrix of life” for its fascinating properties. The well-known simple water molecule consists of one oxygen atom and two hydrogen atoms, covering most of planet earth’ssurface. It is the most studied element in science; however, its properties are still not fully understood. Another es...
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Stockholms universitet, Fysikum
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ndltd-UPSALLA1-oai-DiVA.org-su-1725132019-09-03T05:27:01ZInvestigating the influence of water in lysozyme structure and dynamics using FT-IR and XRDengYousif, RafatStockholms universitet, Fysikum2019waterlysozymecrystalline watersupercooled waterhydrogen bondsFT-IRXRDhydration waterprotein foldingprotein dynamic transitionPhysical ChemistryFysikalisk kemiBiochemistry and Molecular BiologyBiokemi och molekylärbiologiWater is “the matrix of life” for its fascinating properties. The well-known simple water molecule consists of one oxygen atom and two hydrogen atoms, covering most of planet earth’ssurface. It is the most studied element in science; however, its properties are still not fully understood. Another essential building block of life is proteins, which manifest naturally in aqueous environments. The protein activity is controlled by the protein folding process that is dependent on the surrounding environment. It is hypothesized that the hydrogen bond network of water plays an important role in the folding process. Here, we investigate the protein lysozyme in liquid water as well as in the crystalline state ice Ih, exploring various temperatures, using FT-IR and XRD. Our main finding is that a transition occurs at approximately T=210 K, indicative of the hypothesised protein dynamic “glass” transitionobserved by previous studies in supercooled water at similar temperatures. Student thesisinfo:eu-repo/semantics/bachelorThesistexthttp://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-172513application/pdfinfo:eu-repo/semantics/openAccess |
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English |
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Others
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water lysozyme crystalline water supercooled water hydrogen bonds FT-IR XRD hydration water protein folding protein dynamic transition Physical Chemistry Fysikalisk kemi Biochemistry and Molecular Biology Biokemi och molekylärbiologi |
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water lysozyme crystalline water supercooled water hydrogen bonds FT-IR XRD hydration water protein folding protein dynamic transition Physical Chemistry Fysikalisk kemi Biochemistry and Molecular Biology Biokemi och molekylärbiologi Yousif, Rafat Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
description |
Water is “the matrix of life” for its fascinating properties. The well-known simple water molecule consists of one oxygen atom and two hydrogen atoms, covering most of planet earth’ssurface. It is the most studied element in science; however, its properties are still not fully understood. Another essential building block of life is proteins, which manifest naturally in aqueous environments. The protein activity is controlled by the protein folding process that is dependent on the surrounding environment. It is hypothesized that the hydrogen bond network of water plays an important role in the folding process. Here, we investigate the protein lysozyme in liquid water as well as in the crystalline state ice Ih, exploring various temperatures, using FT-IR and XRD. Our main finding is that a transition occurs at approximately T=210 K, indicative of the hypothesised protein dynamic “glass” transitionobserved by previous studies in supercooled water at similar temperatures. |
author |
Yousif, Rafat |
author_facet |
Yousif, Rafat |
author_sort |
Yousif, Rafat |
title |
Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
title_short |
Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
title_full |
Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
title_fullStr |
Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
title_full_unstemmed |
Investigating the influence of water in lysozyme structure and dynamics using FT-IR and XRD |
title_sort |
investigating the influence of water in lysozyme structure and dynamics using ft-ir and xrd |
publisher |
Stockholms universitet, Fysikum |
publishDate |
2019 |
url |
http://urn.kb.se/resolve?urn=urn:nbn:se:su:diva-172513 |
work_keys_str_mv |
AT yousifrafat investigatingtheinfluenceofwaterinlysozymestructureanddynamicsusingftirandxrd |
_version_ |
1719243188683669504 |