Deriving and Visualizing Uncertainty in Kinetic PET Modeling

Kinetic modeling is the tool of choice when developing new positron emission tomography (PET) tracers for quantitative functional analysis. Several approaches are widely used to facilitate this process. While all these approaches are inherently different, they are still subject to uncertainty arisin...

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Main Authors: Nguyen, Khoa, Bock, Alexander, Ynnerman, Anders, Ropinski, Timo
Format: Others
Language:English
Published: Linköpings universitet, Medie- och Informationsteknik 2012
Online Access:http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-92834
http://nbn-resolving.de/urn:isbn:978-3-905674-38-5
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spelling ndltd-UPSALLA1-oai-DiVA.org-liu-928342013-06-04T04:09:26ZDeriving and Visualizing Uncertainty in Kinetic PET ModelingengNguyen, KhoaBock, AlexanderYnnerman, AndersRopinski, TimoLinköpings universitet, Medie- och InformationsteknikLinköpings universitet, Tekniska högskolanLinköpings universitet, Medie- och InformationsteknikLinköpings universitet, Tekniska högskolanLinköpings universitet, Centrum för medicinsk bildvetenskap och visualisering, CMIVLinköpings universitet, Medie- och InformationsteknikLinköpings universitet, Tekniska högskolanLinköpings universitet, Medie- och InformationsteknikLinköpings universitet, Tekniska högskolan2012Kinetic modeling is the tool of choice when developing new positron emission tomography (PET) tracers for quantitative functional analysis. Several approaches are widely used to facilitate this process. While all these approaches are inherently different, they are still subject to uncertainty arising from various stages of the modeling process. In this paper we propose a novel approach for deriving and visualizing uncertainty in kinetic PET modeling. We distinguish between intra- and inter-model uncertainties. While intra-model uncertainty allows us to derive uncertainty based on a single modeling approach, inter-model uncertainty arises from the differences of the results of different approaches. To derive intra-model uncertainty we exploit the covariance matrix analysis. The inter-model uncertainty is derived by comparing the outcome of three standard kinetic PET modeling approaches. We derive and visualize this uncertainty to exploit it as a basis for changing model input parameters with the ultimate goal to reduce the modeling uncertainty and thus obtain a more realistic model of the tracer under investigation. To support this uncertainty reduction process, we visually link abstract and spatial data by introducing a novel visualization approach based on the ThemeRiver metaphor, which has been modified to support the uncertainty-aware visualization of parameter changes between spatial locations. We have investigated the benefits of the presented concepts by conducting an evaluation with domain experts. Conference paperinfo:eu-repo/semantics/conferenceObjecttexthttp://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-92834urn:isbn:978-3-905674-38-5Eurographics Workshop on Visual Computing for Biology and Medicine, 2070-5778, EISSN 2070-5786Eurographics Workshop on Visual Computing for Biology and Medicine, 2012, p. 107-114application/pdfinfo:eu-repo/semantics/openAccess
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description Kinetic modeling is the tool of choice when developing new positron emission tomography (PET) tracers for quantitative functional analysis. Several approaches are widely used to facilitate this process. While all these approaches are inherently different, they are still subject to uncertainty arising from various stages of the modeling process. In this paper we propose a novel approach for deriving and visualizing uncertainty in kinetic PET modeling. We distinguish between intra- and inter-model uncertainties. While intra-model uncertainty allows us to derive uncertainty based on a single modeling approach, inter-model uncertainty arises from the differences of the results of different approaches. To derive intra-model uncertainty we exploit the covariance matrix analysis. The inter-model uncertainty is derived by comparing the outcome of three standard kinetic PET modeling approaches. We derive and visualize this uncertainty to exploit it as a basis for changing model input parameters with the ultimate goal to reduce the modeling uncertainty and thus obtain a more realistic model of the tracer under investigation. To support this uncertainty reduction process, we visually link abstract and spatial data by introducing a novel visualization approach based on the ThemeRiver metaphor, which has been modified to support the uncertainty-aware visualization of parameter changes between spatial locations. We have investigated the benefits of the presented concepts by conducting an evaluation with domain experts.
author Nguyen, Khoa
Bock, Alexander
Ynnerman, Anders
Ropinski, Timo
spellingShingle Nguyen, Khoa
Bock, Alexander
Ynnerman, Anders
Ropinski, Timo
Deriving and Visualizing Uncertainty in Kinetic PET Modeling
author_facet Nguyen, Khoa
Bock, Alexander
Ynnerman, Anders
Ropinski, Timo
author_sort Nguyen, Khoa
title Deriving and Visualizing Uncertainty in Kinetic PET Modeling
title_short Deriving and Visualizing Uncertainty in Kinetic PET Modeling
title_full Deriving and Visualizing Uncertainty in Kinetic PET Modeling
title_fullStr Deriving and Visualizing Uncertainty in Kinetic PET Modeling
title_full_unstemmed Deriving and Visualizing Uncertainty in Kinetic PET Modeling
title_sort deriving and visualizing uncertainty in kinetic pet modeling
publisher Linköpings universitet, Medie- och Informationsteknik
publishDate 2012
url http://urn.kb.se/resolve?urn=urn:nbn:se:liu:diva-92834
http://nbn-resolving.de/urn:isbn:978-3-905674-38-5
work_keys_str_mv AT nguyenkhoa derivingandvisualizinguncertaintyinkineticpetmodeling
AT bockalexander derivingandvisualizinguncertaintyinkineticpetmodeling
AT ynnermananders derivingandvisualizinguncertaintyinkineticpetmodeling
AT ropinskitimo derivingandvisualizinguncertaintyinkineticpetmodeling
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