Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species
碩士 === 國立臺灣大學 === 森林環境暨資源學研究所 === 104 === The liliaceous Tricyrtis Wall. is an East Asian endemic genus of ca. 20 mainly perennial herbaceous species inhabiting humid temperate environments. Previous biogeographic hypotheses were proposed based on inferences of morphology, ecology, and inadequately...
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ndltd-TW-104NTU053590182017-04-29T04:31:56Z http://ndltd.ncl.edu.tw/handle/99803931746223587639 Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species 百合科油點草屬之分子系統學研究:親緣關係、生物地理與臺灣產物種之分類修訂 Hsin-Huei Huang 黃馨卉 碩士 國立臺灣大學 森林環境暨資源學研究所 104 The liliaceous Tricyrtis Wall. is an East Asian endemic genus of ca. 20 mainly perennial herbaceous species inhabiting humid temperate environments. Previous biogeographic hypotheses were proposed based on inferences of morphology, ecology, and inadequately executed molecular phylogenetic studies with poor supports. Morphologically, the Taiwanese Tricyrtis are distinct and ecologically exceptional in their mainly subtropical distribution. However, the unsettled taxonomy of Taiwanese Tricyrtis as manifested by a long list of nomenclatural also suggests that further study is needed. This study aims to test the biogeographic hypothesis of the genus and improve the taxonomic treatment of Taiwanese taxa by reconstructing phylogenetic relationship based on DNA sequence data. This study reconstructs phylogenetic relationships of Tricyrtis based on DNA sequences of 5 chloroplast regions (rps16 intron, trnL-trnF, atpF-atpH, psbM-ycf6, rpl32-trnL spacer) and nuclear ribosomal intergenic transcribed spacer (ITS). To test species hypothesis of Taiwanese Tricyrtis, haplotype networks were reconstructed using rps 16 intron and ITS. Biogeographic analyses based on molecular phylogenetic relationships show that current species of Tricyrtis is most likely originated in Japan and subsequently dispersed to Korea, China and other regions. Haplotype networks of both chloroplast and ITS sequences of Taiwanese species reveal non-monophyly of T. formosana, T. lasiocarpa, and T. ravenii, suggesting incomplete speciation of the three taxa. The taxonomic treatment of treating them as three varieties under T. formosana is proposed. Kou-Fang Chung 鍾國芳 2016 學位論文 ; thesis 69 zh-TW |
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碩士 === 國立臺灣大學 === 森林環境暨資源學研究所 === 104 === The liliaceous Tricyrtis Wall. is an East Asian endemic genus of ca. 20 mainly perennial herbaceous species inhabiting humid temperate environments. Previous biogeographic hypotheses were proposed based on inferences of morphology, ecology, and inadequately executed molecular phylogenetic studies with poor supports. Morphologically, the Taiwanese Tricyrtis are distinct and ecologically exceptional in their mainly subtropical distribution. However, the unsettled taxonomy of Taiwanese Tricyrtis as manifested by a long list of nomenclatural also suggests that further study is needed. This study aims to test the biogeographic hypothesis of the genus and improve the taxonomic treatment of Taiwanese taxa by reconstructing phylogenetic relationship based on DNA sequence data. This study reconstructs phylogenetic relationships of Tricyrtis based on DNA sequences of 5 chloroplast regions (rps16 intron, trnL-trnF, atpF-atpH, psbM-ycf6, rpl32-trnL spacer) and nuclear ribosomal intergenic transcribed spacer (ITS). To test species hypothesis of Taiwanese Tricyrtis, haplotype networks were reconstructed using rps 16 intron and ITS. Biogeographic analyses based on molecular phylogenetic relationships show that current species of Tricyrtis is most likely originated in Japan and subsequently dispersed to Korea, China and other regions. Haplotype networks of both chloroplast and ITS sequences of Taiwanese species reveal non-monophyly of T. formosana, T. lasiocarpa, and T. ravenii, suggesting incomplete speciation of the three taxa. The taxonomic treatment of treating them as three varieties under T. formosana is proposed.
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author2 |
Kou-Fang Chung |
author_facet |
Kou-Fang Chung Hsin-Huei Huang 黃馨卉 |
author |
Hsin-Huei Huang 黃馨卉 |
spellingShingle |
Hsin-Huei Huang 黃馨卉 Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
author_sort |
Hsin-Huei Huang |
title |
Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
title_short |
Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
title_full |
Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
title_fullStr |
Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
title_full_unstemmed |
Molecular systematics of Tricyrtis Wall. (Liliaceae): phylogenetic biogeography and taxonomy of Taiwanese species |
title_sort |
molecular systematics of tricyrtis wall. (liliaceae): phylogenetic biogeography and taxonomy of taiwanese species |
publishDate |
2016 |
url |
http://ndltd.ncl.edu.tw/handle/99803931746223587639 |
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