Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family

碩士 === 臺北醫學大學 === 醫學研究所 === 94 === Infections caused by multidrug-resistant bacteria expressing extended -spectrum -lactamases (ESBLs) pose serious challenges to clinicians. Extended-spectrum -lactamases (ESBLs) are plasmid-mediated bacterial enzymes that confer resistance to a broad range of -la...

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Main Authors: Shih-Yuan Huang, 黃詩淵
Other Authors: Jui-Yu Wu
Format: Others
Language:zh-TW
Published: 2006
Online Access:http://ndltd.ncl.edu.tw/handle/46198716924283371623
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spelling ndltd-TW-094TMC005340252015-12-18T04:03:44Z http://ndltd.ncl.edu.tw/handle/46198716924283371623 Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family 建立超廣譜乙內醯胺酶(ESBL)病原菌與整合子之分子分型資料庫 Shih-Yuan Huang 黃詩淵 碩士 臺北醫學大學 醫學研究所 94 Infections caused by multidrug-resistant bacteria expressing extended -spectrum -lactamases (ESBLs) pose serious challenges to clinicians. Extended-spectrum -lactamases (ESBLs) are plasmid-mediated bacterial enzymes that confer resistance to a broad range of -lactams. Most ESBLs have evolved by genetic mutation from native -lactamases, such as TEM-1, TEM-2, and SHV-1. These parent enzymes are commonly found in Gram-negative bacteria, particularly enterobacteriaceae; they are highly active against penicillins and modestly active against early-generation cephalosporins. The prevalence of infections caused by extended-spectrum -lactamase (ESBL)–producing Enterobacteriaceae is increasing worldwide. Because ESBL-producing strains are resistant to a wide variety of commonly used antimicrobials, their proliferation poses a serious global health concern that has complicated treatment strategies for a growing number of hospitalized patients. Although ESBLs have been reported most frequently in Escherichia coli and Klebsiella species , they have been found in other bacterial species as well, including Salmonella enterica, Pseudomonas aeruginosa, and Serratia marcescens . Bacterial resistance to an increasing number of antimicrobial agents is a well-established problem. In recent years, a novel group of DNA elements able to incorporate antibiotic resistance genes by a site-specific recombination have been identified in Gram-negative bacteria. These elements have been termed integrons. Gene transfer into small genomes and into plasmids is via site-specific recombination. Integron act as reporters of antibiotic resistance cassettes. As such, integron-driven gene capture is likely to be an important factor in the more general process of horizontal gene transfer in the evolution of bacterial genomes. An increase in the number of cases of ESBL has been observed over the past few years in the hospital of major medical center in Taiwan, and will be the great challenge to overcome this threatens. There are total 323 drug-resistant ESBL have collected, in which 223 clinical isolates are from the Taipei Medical University Hospital. Other 100 samples were kindly provided by Dr. P. R. Hsueh (NTU, School of Medicine) which collected from the major medical centers in Taiwan including north, central, south, and east regions. The objectives of this proposed project are (i) to investigate the molecular epidemiology of ESBL colonization and infection in the hospital, (ii) to evaluate the diffusion of integron types among clinical isolates of ESBL in Taiwan and to carry out a molecular characterization of their gene cassette arrays, (iii) to study the molecular epidemiology of ESBL antimicrobial resistance, (iv) to evaluate the contribution of integrons and efflux pump to the multiple antibiotic resistance and nosocomial spread of ESBL strains, and (v) to identify clinical and therapeutic factors contributing to the selection of multidrug-resistant ESBL in the hospital environment. Jui-Yu Wu 吳瑞裕 2006 學位論文 ; thesis 0 zh-TW
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description 碩士 === 臺北醫學大學 === 醫學研究所 === 94 === Infections caused by multidrug-resistant bacteria expressing extended -spectrum -lactamases (ESBLs) pose serious challenges to clinicians. Extended-spectrum -lactamases (ESBLs) are plasmid-mediated bacterial enzymes that confer resistance to a broad range of -lactams. Most ESBLs have evolved by genetic mutation from native -lactamases, such as TEM-1, TEM-2, and SHV-1. These parent enzymes are commonly found in Gram-negative bacteria, particularly enterobacteriaceae; they are highly active against penicillins and modestly active against early-generation cephalosporins. The prevalence of infections caused by extended-spectrum -lactamase (ESBL)–producing Enterobacteriaceae is increasing worldwide. Because ESBL-producing strains are resistant to a wide variety of commonly used antimicrobials, their proliferation poses a serious global health concern that has complicated treatment strategies for a growing number of hospitalized patients. Although ESBLs have been reported most frequently in Escherichia coli and Klebsiella species , they have been found in other bacterial species as well, including Salmonella enterica, Pseudomonas aeruginosa, and Serratia marcescens . Bacterial resistance to an increasing number of antimicrobial agents is a well-established problem. In recent years, a novel group of DNA elements able to incorporate antibiotic resistance genes by a site-specific recombination have been identified in Gram-negative bacteria. These elements have been termed integrons. Gene transfer into small genomes and into plasmids is via site-specific recombination. Integron act as reporters of antibiotic resistance cassettes. As such, integron-driven gene capture is likely to be an important factor in the more general process of horizontal gene transfer in the evolution of bacterial genomes. An increase in the number of cases of ESBL has been observed over the past few years in the hospital of major medical center in Taiwan, and will be the great challenge to overcome this threatens. There are total 323 drug-resistant ESBL have collected, in which 223 clinical isolates are from the Taipei Medical University Hospital. Other 100 samples were kindly provided by Dr. P. R. Hsueh (NTU, School of Medicine) which collected from the major medical centers in Taiwan including north, central, south, and east regions. The objectives of this proposed project are (i) to investigate the molecular epidemiology of ESBL colonization and infection in the hospital, (ii) to evaluate the diffusion of integron types among clinical isolates of ESBL in Taiwan and to carry out a molecular characterization of their gene cassette arrays, (iii) to study the molecular epidemiology of ESBL antimicrobial resistance, (iv) to evaluate the contribution of integrons and efflux pump to the multiple antibiotic resistance and nosocomial spread of ESBL strains, and (v) to identify clinical and therapeutic factors contributing to the selection of multidrug-resistant ESBL in the hospital environment.
author2 Jui-Yu Wu
author_facet Jui-Yu Wu
Shih-Yuan Huang
黃詩淵
author Shih-Yuan Huang
黃詩淵
spellingShingle Shih-Yuan Huang
黃詩淵
Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
author_sort Shih-Yuan Huang
title Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
title_short Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
title_full Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
title_fullStr Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
title_full_unstemmed Database Establishment of ESBL Pathogens Molecular Fingerprinting and Related Integron Family
title_sort database establishment of esbl pathogens molecular fingerprinting and related integron family
publishDate 2006
url http://ndltd.ncl.edu.tw/handle/46198716924283371623
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