Genetic diversity of rice germplasm revealed by DNA polymorphism.

碩士 === 國立中興大學 === 植物學系 === 84 === Rice is a staple crop that distributes in temperate, tropical and subtropical regions. It contains rice cultivars (Indica and Japonica) and wild rice; the former is consist of O. sativa L. and O. glaber...

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Bibliographic Details
Main Authors: Huang, Feng-Nai, 黃丰乃
Other Authors: Lin Maw-Sun
Format: Others
Language:zh-TW
Published: 1996
Online Access:http://ndltd.ncl.edu.tw/handle/22323667964688223819
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Summary:碩士 === 國立中興大學 === 植物學系 === 84 === Rice is a staple crop that distributes in temperate, tropical and subtropical regions. It contains rice cultivars (Indica and Japonica) and wild rice; the former is consist of O. sativa L. and O. glaberrima Steud., and the latter has 20 species. The genetic diversity among 37 rice varieties and accessions (genotypes) wasevaluated by random amplified polymorphic DNA (RAPD). Twenty-six of 54 primers were sufficient polymorphisms and produced 468 banding patterns. One hundred and forty-five molecular markers were scored across Asian rice varieties; 410 molecularmarkers were scored across the remaining rice accessions. When all 26 primers weretaken into consideration, 52.4% of banding patterns were polymorphisms among Asianrice cultivars. On the other hand, 67.2% of banding patterns were polymorphisms amongthe remaining accessions. Therefore, the genetic diversity of Asian rice cultivar issmaller than the genetic diversity of the other rice accessions. Clustering dendrographand 3-D plot were produced by using random sampling of 26 primers. Within AA genome, thesubspecies of O. sativa L. showed closer affinity with O. rufipogon Griff. and O. nivaraSharma et Shastry. The O. glaberrima Steud. were closer affinity with O. barthii A. Chev. than the other species within AA genome. Between BB, CC, CCDD, EE, and FF genome, BBCC(O. punctata Kotschy ex Steud.) and CC (O. officinalis Wall ex Watt) genome species clustered together with CCDD (O. alta Swallen) genome species, and EE (O. australiensis Domin.)genome species were closer affinity with BBCC and CCDD genome species. FF (O.brachyantha A. Chev. et Roehr.) accession was closer affinity with AA genome species. Because of the deficiency of sampling rice varieties and accessions, we should increasethe number of rice varieties or accessions to recognize the genetic relationships of ricevarieties or accessions. The results derived from clustering dendrograph were consistent with pedigree analysisand geographical distribution. Therefore, RAPD method can assist the other technologies andprovides the reference of breeding programs.