Analysis of Mass Spectra using Artificial Neural Networks to identify the primary structure of peptides

碩士 === 國立交通大學 === 應用化學系 === 82 === Bidirectional Associative Memory (BAM) and Holography are two artificial neural networks that have the characteristic of granting content addressable memory of bidirectional space. Using the optimized line...

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Bibliographic Details
Main Authors: Tsai Chih song, 蔡枝松
Other Authors: Yu Tiing
Format: Others
Language:zh-TW
Published: 1994
Online Access:http://ndltd.ncl.edu.tw/handle/15613651966973857287
Description
Summary:碩士 === 國立交通大學 === 應用化學系 === 82 === Bidirectional Associative Memory (BAM) and Holography are two artificial neural networks that have the characteristic of granting content addressable memory of bidirectional space. Using the optimized linear combination of heterogeneous forms of Lyapunov energy, BAM and holography can be shaped into a so- called Modified Intraconnection Bidirectional Associative Memory (MIBAM) network. The network developed in this laboratory is applied in the analysis of mass spectra of peptides. The a mino acid sequence is an essential piece of information in the study of peptide molecules. Since the invention of Fast Atom Bombardment (FAB) ionization, the peptide sample can be directly introduced to the mass spectrometer without a lot of pretreatment. Accordingly, mass spectrometry has evolved as one of the sequencing techniques. In this study, the calculated amino acid mass fragments are input as the encode vector of the MIBAM network to obtain the weighting matrix of the long term memory. The ne twork then recalls (deduces) the residue of the peptides sequentially according to the mass spectra. The MIBAM network developed in this work proves to handle signals of sparse vector (such as mass signals in this study) extraordinarily well. Several known peptides are analyzed to test the feasibility of this technique. The advantages and limitations are discussed. Apparently this preliminary work has pointed the right direction for identification of the primary structure of peptides using our MIBAM network.