Investigation of the directed self-assembly process in bacteriophage virus structures using the discrete element method

<p>Current researchers have looked to nature to learn how self-assembly processes occur. By understanding the self-assembly process, designers can begin to build strong structural materials that are extremely light weight. The discrete element modeling method was used to gain a better understa...

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Bibliographic Details
Main Author: McInnis, David Peter
Other Authors: Tonya Stone
Format: Others
Language:en
Published: MSSTATE 2017
Subjects:
Online Access:http://sun.library.msstate.edu/ETD-db/theses/available/etd-10262017-210555/
Description
Summary:<p>Current researchers have looked to nature to learn how self-assembly processes occur. By understanding the self-assembly process, designers can begin to build strong structural materials that are extremely light weight. The discrete element modeling method was used to gain a better understanding of the directed self-assembly of M13 bacteriophage. This model was parameterized from molecular dynamics simulations at the nanometer scale. Three types of functionalized bacteriophage were studied: Wild-type, 4E, and CLP8. Results showed that Wild-type phage are attracted in a head-to-tail orientation, but repelled in head-to-head orientation. The 4E bacteriophage behaved similarly with a stronger bond in the head-to-tail orientation, and CLP8 showed to physically repel in either orientation. The overall finding was that the electrostatic physics dominated as the controlling forces of the phage interactions.</p>