Design and characterization of artificial transcriptional terminators

Thesis (M. Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2007. === Includes bibliographical references (p. 103-104). === Design and characterization of artificial transcriptional terminators. Ten new terminators were designed based on previous re...

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Main Author: Huang, Haiyao
Other Authors: Thomas F. Knight, Jr.
Format: Others
Language:English
Published: Massachusetts Institute of Technology 2009
Subjects:
Online Access:http://hdl.handle.net/1721.1/45981
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spelling ndltd-MIT-oai-dspace.mit.edu-1721.1-459812019-05-02T15:48:50Z Design and characterization of artificial transcriptional terminators Huang, Haiyao Thomas F. Knight, Jr. Massachusetts Institute of Technology. Dept. of Electrical Engineering and Computer Science. Massachusetts Institute of Technology. Dept. of Electrical Engineering and Computer Science. Electrical Engineering and Computer Science. Thesis (M. Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2007. Includes bibliographical references (p. 103-104). Design and characterization of artificial transcriptional terminators. Ten new terminators were designed based on previous research of terminator structure and termination efficiency. The terminators were built by PCR extension, ligated into a BioBrick plasmid backbone, and transformed into TOP10 cells. Characterization devices were built to test the terminators. Input and output of the terminator were measured by expression of RFP and GFP. Charaterization devices were then placed into the E. coli strain CW2553/pJAT18, which hijacks the arabinose transport system to provide controlled input to the terminator. Of the ten terminators designed and tested, BBa_B1002, BBa_B1004, BBa_B1006 and BBa_B1010 proved to be strong terminators with termination efficiencies above 90%. These terminators may be obtained from the Registry of Standarized Parts at parts.mit.edu. by Haiyao Huang. M.Eng. 2009-06-30T16:54:37Z 2009-06-30T16:54:37Z 2007 2007 Thesis http://hdl.handle.net/1721.1/45981 334966967 eng M.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission. http://dspace.mit.edu/handle/1721.1/7582 104 p. application/pdf Massachusetts Institute of Technology
collection NDLTD
language English
format Others
sources NDLTD
topic Electrical Engineering and Computer Science.
spellingShingle Electrical Engineering and Computer Science.
Huang, Haiyao
Design and characterization of artificial transcriptional terminators
description Thesis (M. Eng.)--Massachusetts Institute of Technology, Dept. of Electrical Engineering and Computer Science, 2007. === Includes bibliographical references (p. 103-104). === Design and characterization of artificial transcriptional terminators. Ten new terminators were designed based on previous research of terminator structure and termination efficiency. The terminators were built by PCR extension, ligated into a BioBrick plasmid backbone, and transformed into TOP10 cells. Characterization devices were built to test the terminators. Input and output of the terminator were measured by expression of RFP and GFP. Charaterization devices were then placed into the E. coli strain CW2553/pJAT18, which hijacks the arabinose transport system to provide controlled input to the terminator. Of the ten terminators designed and tested, BBa_B1002, BBa_B1004, BBa_B1006 and BBa_B1010 proved to be strong terminators with termination efficiencies above 90%. These terminators may be obtained from the Registry of Standarized Parts at parts.mit.edu. === by Haiyao Huang. === M.Eng.
author2 Thomas F. Knight, Jr.
author_facet Thomas F. Knight, Jr.
Huang, Haiyao
author Huang, Haiyao
author_sort Huang, Haiyao
title Design and characterization of artificial transcriptional terminators
title_short Design and characterization of artificial transcriptional terminators
title_full Design and characterization of artificial transcriptional terminators
title_fullStr Design and characterization of artificial transcriptional terminators
title_full_unstemmed Design and characterization of artificial transcriptional terminators
title_sort design and characterization of artificial transcriptional terminators
publisher Massachusetts Institute of Technology
publishDate 2009
url http://hdl.handle.net/1721.1/45981
work_keys_str_mv AT huanghaiyao designandcharacterizationofartificialtranscriptionalterminators
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