Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1

In this study, I investigated two novel transporters associated with cholic acid catabolism in Rhodococcus jostii RHA1. Reverse-transcriptase quantitative-PCR indicated that an ABC transporter was upregulated 16.7-fold and an MFS transporter was upregulated 174-fold during the exponential phase of g...

Full description

Bibliographic Details
Main Author: Swain, Kendra Lynn
Language:English
Published: University of British Columbia 2011
Online Access:http://hdl.handle.net/2429/37017
id ndltd-LACETR-oai-collectionscanada.gc.ca-BVAU.2429-37017
record_format oai_dc
spelling ndltd-LACETR-oai-collectionscanada.gc.ca-BVAU.2429-370172014-03-26T03:38:08Z Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1 Swain, Kendra Lynn In this study, I investigated two novel transporters associated with cholic acid catabolism in Rhodococcus jostii RHA1. Reverse-transcriptase quantitative-PCR indicated that an ABC transporter was upregulated 16.7-fold and an MFS transporter was upregulated 174-fold during the exponential phase of growth on cholic acid compared to pyruvate. With gene knockout analysis, I discovered that these transporters are required for the reassimilation of distinct cholic acid metabolites. The ABC transporter, encoded by the camABCD genes, was essential for uptake of 12-hydroxy-9-oxo-1,2,3,4,10,19,23,24-octanorcholan-5,22-dioic acid and 12-hydroxy-9-oxo-1,2,3,4,10,19,23,24-octanorchol-6-en-5,22-dioic acid. The MFS transporter, encoded by the camM gene, was essential for uptake of 3,7,12-trihydroxy-9-oxo-9,10-seco-23,24-bisnorchola-1,3,5(10)-trien-22-oic acid. The uptake of these metabolites is necessary for maximal growth on cholic acid: the ΔcamB mutant, lacking the permease component of the ABC transporter, and the ΔcamM mutant, lacking the MFS transporter, only achieved 74% and 77%, respectively, of the final wild type protein yield. These metabolites differ from previously reported cholic acid metabolites from Proteobacteria in that they retain an isopropionyl side chain at the C17 position. This study is the first to demonstrate the function of putative cholic acid genes through targeted mutagenesis, as well as the first to provide evidence for the requirement for transporters involved in cholic acid metabolite uptake. This work highlights the importance and complexity of transport processes associated with bacterial catabolism and may contribute to industrial applications involving bacterial steroid transformation. 2011-08-31T14:37:23Z 2011-08-31T14:37:23Z 2011 2011-08-31 2011-11 Electronic Thesis or Dissertation http://hdl.handle.net/2429/37017 eng University of British Columbia
collection NDLTD
language English
sources NDLTD
description In this study, I investigated two novel transporters associated with cholic acid catabolism in Rhodococcus jostii RHA1. Reverse-transcriptase quantitative-PCR indicated that an ABC transporter was upregulated 16.7-fold and an MFS transporter was upregulated 174-fold during the exponential phase of growth on cholic acid compared to pyruvate. With gene knockout analysis, I discovered that these transporters are required for the reassimilation of distinct cholic acid metabolites. The ABC transporter, encoded by the camABCD genes, was essential for uptake of 12-hydroxy-9-oxo-1,2,3,4,10,19,23,24-octanorcholan-5,22-dioic acid and 12-hydroxy-9-oxo-1,2,3,4,10,19,23,24-octanorchol-6-en-5,22-dioic acid. The MFS transporter, encoded by the camM gene, was essential for uptake of 3,7,12-trihydroxy-9-oxo-9,10-seco-23,24-bisnorchola-1,3,5(10)-trien-22-oic acid. The uptake of these metabolites is necessary for maximal growth on cholic acid: the ΔcamB mutant, lacking the permease component of the ABC transporter, and the ΔcamM mutant, lacking the MFS transporter, only achieved 74% and 77%, respectively, of the final wild type protein yield. These metabolites differ from previously reported cholic acid metabolites from Proteobacteria in that they retain an isopropionyl side chain at the C17 position. This study is the first to demonstrate the function of putative cholic acid genes through targeted mutagenesis, as well as the first to provide evidence for the requirement for transporters involved in cholic acid metabolite uptake. This work highlights the importance and complexity of transport processes associated with bacterial catabolism and may contribute to industrial applications involving bacterial steroid transformation.
author Swain, Kendra Lynn
spellingShingle Swain, Kendra Lynn
Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
author_facet Swain, Kendra Lynn
author_sort Swain, Kendra Lynn
title Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
title_short Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
title_full Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
title_fullStr Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
title_full_unstemmed Two novel transporters essential for the reassimilation of cholic acid metabolites excreted by Rhodococcus jostii RHA1
title_sort two novel transporters essential for the reassimilation of cholic acid metabolites excreted by rhodococcus jostii rha1
publisher University of British Columbia
publishDate 2011
url http://hdl.handle.net/2429/37017
work_keys_str_mv AT swainkendralynn twonoveltransportersessentialforthereassimilationofcholicacidmetabolitesexcretedbyrhodococcusjostiirha1
_version_ 1716656052307492864