Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression

Master of Science === Department of Plant Pathology === Harold Trick === The object of this study was to find a target sequence for the known Heterodera glycines Y25 sequence that contained no homology to any known Glycine max genes so homologous endogenous soybean gene expression will not be effect...

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Main Author: Brady, Chad R.
Language:en_US
Published: Kansas State University 2013
Subjects:
Online Access:http://hdl.handle.net/2097/16787
id ndltd-KSU-oai-krex.k-state.edu-2097-16787
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spelling ndltd-KSU-oai-krex.k-state.edu-2097-167872017-03-03T15:45:08Z Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression Brady, Chad R. Ribonucleic acid interferance Nematode Heterodera glycines Insecticide Plant transformations Soybean Plant Pathology (0480) Plant Sciences (0479) Master of Science Department of Plant Pathology Harold Trick The object of this study was to find a target sequence for the known Heterodera glycines Y25 sequence that contained no homology to any known Glycine max genes so homologous endogenous soybean gene expression will not be effected. In addition, in attempt to improve the accuracy of SCN bioassays performed in greenhouse settings, applications of a variety of insecticides with differing modes of action were applied to screen for any detectable effects on the SCN populations. The full-length sequence of the Y25 gene was blasted against the G. max genome using the National Center for Biotechnology Information blast database and a portion of the gene was found to contained no homology to the G. max genome. A rapid hairy root assay was used to screen for resistance to H. glycines. The sequence was transformed into Agrobacterium rhizogenes using a modified heat shock method. The transformed A. rhizogenes were used to inoculate soybean seedlings. The inoculated seedlings developed hairy roots expressing the target sequence. Upon finishing the hairy root assay it was discovered that there were no detectable differences across any of the treatments or the controls. It was neither proved nor disproved that the new target sequence containing no homology to the G. max genome was as effective as the original target. Further investigation will need to be conducted to show the level of control for the new target sequence. 2013-11-12T14:02:14Z 2013-11-12T14:02:14Z 2013-11-12 2013 December Thesis http://hdl.handle.net/2097/16787 en_US Kansas State University
collection NDLTD
language en_US
sources NDLTD
topic Ribonucleic acid interferance
Nematode
Heterodera glycines
Insecticide
Plant transformations
Soybean
Plant Pathology (0480)
Plant Sciences (0479)
spellingShingle Ribonucleic acid interferance
Nematode
Heterodera glycines
Insecticide
Plant transformations
Soybean
Plant Pathology (0480)
Plant Sciences (0479)
Brady, Chad R.
Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
description Master of Science === Department of Plant Pathology === Harold Trick === The object of this study was to find a target sequence for the known Heterodera glycines Y25 sequence that contained no homology to any known Glycine max genes so homologous endogenous soybean gene expression will not be effected. In addition, in attempt to improve the accuracy of SCN bioassays performed in greenhouse settings, applications of a variety of insecticides with differing modes of action were applied to screen for any detectable effects on the SCN populations. The full-length sequence of the Y25 gene was blasted against the G. max genome using the National Center for Biotechnology Information blast database and a portion of the gene was found to contained no homology to the G. max genome. A rapid hairy root assay was used to screen for resistance to H. glycines. The sequence was transformed into Agrobacterium rhizogenes using a modified heat shock method. The transformed A. rhizogenes were used to inoculate soybean seedlings. The inoculated seedlings developed hairy roots expressing the target sequence. Upon finishing the hairy root assay it was discovered that there were no detectable differences across any of the treatments or the controls. It was neither proved nor disproved that the new target sequence containing no homology to the G. max genome was as effective as the original target. Further investigation will need to be conducted to show the level of control for the new target sequence.
author Brady, Chad R.
author_facet Brady, Chad R.
author_sort Brady, Chad R.
title Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
title_short Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
title_full Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
title_fullStr Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
title_full_unstemmed Pest management for SCN bioassays and creation of new RNAI constructs for nematode suppression
title_sort pest management for scn bioassays and creation of new rnai constructs for nematode suppression
publisher Kansas State University
publishDate 2013
url http://hdl.handle.net/2097/16787
work_keys_str_mv AT bradychadr pestmanagementforscnbioassaysandcreationofnewrnaiconstructsfornematodesuppression
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