The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II

Protein dynamics play a key role in enzyme-catalyzed reactions. Vibrational spectroscopy provides a method to follow these structural changes and thereby describe the reaction coordinate as a function of space and time. A vibrational spectroscopic technique, reaction-induced FTIR spectroscopy, has b...

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Main Author: Polander, Brandon C.
Other Authors: Barry, Bridgette A.
Format: Others
Language:en_US
Published: Georgia Institute of Technology 2014
Subjects:
Online Access:http://hdl.handle.net/1853/50222
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spelling ndltd-GATECH-oai-smartech.gatech.edu-1853-502222014-05-07T03:42:56ZThe hydrogen-bonded water network in the oxygen-evolving complex of photosystem IIPolander, Brandon C.Photosystem IIVibrational spectroscopyWater oxidationAmide carbonyl frequencyReaction-induced FTIRProteinsMolecular dynamicsPhotosynthesisProtein dynamics play a key role in enzyme-catalyzed reactions. Vibrational spectroscopy provides a method to follow these structural changes and thereby describe the reaction coordinate as a function of space and time. A vibrational spectroscopic technique, reaction-induced FTIR spectroscopy, has been applied to the study of the oxygen-evolving complex (OEC) of photosystem II (PSII). In plant photosynthesis, PSII evolves oxygen from the substrate, water, by the accumulation of photo-oxidizing equivalents at the OEC. Molecular oxygen and protons are the products of this reaction, which is responsible for the maintenance of an aerobic atmosphere on earth. The OEC is a Mn4CaO5 cluster with nearby bound chloride ions. Sequentially oxidized states of the OEC are termed the S states. The dark-stable state is S1, and oxygen is released on the transition from S3 to S0. Using short laser flashes, individual S states are generated, allowing vibrational spectroscopy to be used to study these different oxidation states of the OEC. In current X-ray crystal structures, hydrogen bonds to water molecules are predicted to form an extensive network around the Mn4CaO5 cluster. In the OEC, four peptide carbonyl groups are linked to the water network, which extends to two Mn-bound and two Ca-bound water molecules. This dissertation discusses a vibrational spectroscopic method that uses these peptide carbonyl frequencies as reporters of solvatochromic changes in the OEC. This technique provides a new, high-resolution method with which to study water and protein dynamics in PSII and other enzymes.Georgia Institute of TechnologyBarry, Bridgette A.2014-01-13T16:19:35Z2014-01-13T16:19:35Z2013-122013-08-14December 20132014-01-13T16:19:35ZDissertationapplication/pdfhttp://hdl.handle.net/1853/50222en_US
collection NDLTD
language en_US
format Others
sources NDLTD
topic Photosystem II
Vibrational spectroscopy
Water oxidation
Amide carbonyl frequency
Reaction-induced FTIR
Proteins
Molecular dynamics
Photosynthesis
spellingShingle Photosystem II
Vibrational spectroscopy
Water oxidation
Amide carbonyl frequency
Reaction-induced FTIR
Proteins
Molecular dynamics
Photosynthesis
Polander, Brandon C.
The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
description Protein dynamics play a key role in enzyme-catalyzed reactions. Vibrational spectroscopy provides a method to follow these structural changes and thereby describe the reaction coordinate as a function of space and time. A vibrational spectroscopic technique, reaction-induced FTIR spectroscopy, has been applied to the study of the oxygen-evolving complex (OEC) of photosystem II (PSII). In plant photosynthesis, PSII evolves oxygen from the substrate, water, by the accumulation of photo-oxidizing equivalents at the OEC. Molecular oxygen and protons are the products of this reaction, which is responsible for the maintenance of an aerobic atmosphere on earth. The OEC is a Mn4CaO5 cluster with nearby bound chloride ions. Sequentially oxidized states of the OEC are termed the S states. The dark-stable state is S1, and oxygen is released on the transition from S3 to S0. Using short laser flashes, individual S states are generated, allowing vibrational spectroscopy to be used to study these different oxidation states of the OEC. In current X-ray crystal structures, hydrogen bonds to water molecules are predicted to form an extensive network around the Mn4CaO5 cluster. In the OEC, four peptide carbonyl groups are linked to the water network, which extends to two Mn-bound and two Ca-bound water molecules. This dissertation discusses a vibrational spectroscopic method that uses these peptide carbonyl frequencies as reporters of solvatochromic changes in the OEC. This technique provides a new, high-resolution method with which to study water and protein dynamics in PSII and other enzymes.
author2 Barry, Bridgette A.
author_facet Barry, Bridgette A.
Polander, Brandon C.
author Polander, Brandon C.
author_sort Polander, Brandon C.
title The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
title_short The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
title_full The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
title_fullStr The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
title_full_unstemmed The hydrogen-bonded water network in the oxygen-evolving complex of photosystem II
title_sort hydrogen-bonded water network in the oxygen-evolving complex of photosystem ii
publisher Georgia Institute of Technology
publishDate 2014
url http://hdl.handle.net/1853/50222
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