Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii:
Thesis advisor: Marc-Jan Gubbels === Apicomplexan parasites like Toxoplasma gondii have a complex life cycle comprising of transitions between different hosts, different organ systems and between the extracellular and intracellular milieu. The parasite must thus adjust itself and its cellular proces...
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ndltd-BOSTON-oai-dlib.bc.edu-bc-ir_1073152019-05-10T07:38:37Z Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: Dubey, Rashmi Thesis advisor: Marc-Jan Gubbels Text thesis 2017 Boston College English electronic application/pdf Apicomplexan parasites like Toxoplasma gondii have a complex life cycle comprising of transitions between different hosts, different organ systems and between the extracellular and intracellular milieu. The parasite must thus adjust itself and its cellular processes in accordance with its environment. In this dissertation, I have focused on such stage specific behaviors of three distinct intermediate filament-like proteins as well as a glycolytic enzyme, glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH1). These proteins relocate from the cytosol to the unique cortical membrane skeleton of non-dividing parasites. The intermediate filament-like proteins IMC7, 12 and 14, localize exclusively to the mature cytoskeleton. One model of function was that these proteins differentially stabilized mother and budding daughter cytoskeletons in the division process, but we ruled out this role for the individual proteins, as they are not essential for the lytic cycle of the parasite. However, we determined that IMC7 and IMC14 are contributing to the maintenance of rigidity of the cytoskeleton under osmotic stress conditions in extracellular parasites. In addition, IMC14 is critical in cell cycle progression as its depletion results in the formation of multiple daughters per division round. When the parasite egresses from the host cell, glycolytic enzyme GAPDH1 translocates to the cortex. The functional role of GAPDH1 in the parasite and the mechanism of its cortical translocation are deciphered based on the 2.25Å resolution crystal structure of the GAPDH1 holoenzyme in a quaternary complex. These studies identified that GAPDH1’s enzymatic function is essential for intracellular replication but we confirmed the previous reports that glycolysis is not strictly essential in presence of excess L-glutamine. We identify, for the first time, S-loop phosphorylation as a novel, critical regulator of enzymatic activity that is consistent with the notion that the S-loop is critical for cofactor binding, allosteric activation and oligomerization. We show that neither enzymatic activity nor phosphorylation state correlate with the ability to translocate to the cortex. However, we demonstrate that association of GAPDH1 with the cortex is mediated by Cysteine 3 in the N-terminus, likely by palmitoylation. Overall, glycolysis and cortical translocation are functionally decoupled by post-translational modifications. Collectively, the discoveries made in this dissertation reveal unprecedented detail in mechanism and function of cortical protein translocation and thereby identifying new drug targets. crystal structure Cytoskeleton drug target GAPDH IMC translocation Copyright is held by the author, with all rights reserved, unless otherwise noted. Thesis (PhD) — Boston College, 2017. Submitted to: Boston College. Graduate School of Arts and Sciences. Discipline: Biology. http://hdl.handle.net/2345/bc-ir:107315 |
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crystal structure Cytoskeleton drug target GAPDH IMC translocation |
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crystal structure Cytoskeleton drug target GAPDH IMC translocation Dubey, Rashmi Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
description |
Thesis advisor: Marc-Jan Gubbels === Apicomplexan parasites like Toxoplasma gondii have a complex life cycle comprising of transitions between different hosts, different organ systems and between the extracellular and intracellular milieu. The parasite must thus adjust itself and its cellular processes in accordance with its environment. In this dissertation, I have focused on such stage specific behaviors of three distinct intermediate filament-like proteins as well as a glycolytic enzyme, glyceraldehyde-3-phosphate dehydrogenase 1 (GAPDH1). These proteins relocate from the cytosol to the unique cortical membrane skeleton of non-dividing parasites. The intermediate filament-like proteins IMC7, 12 and 14, localize exclusively to the mature cytoskeleton. One model of function was that these proteins differentially stabilized mother and budding daughter cytoskeletons in the division process, but we ruled out this role for the individual proteins, as they are not essential for the lytic cycle of the parasite. However, we determined that IMC7 and IMC14 are contributing to the maintenance of rigidity of the cytoskeleton under osmotic stress conditions in extracellular parasites. In addition, IMC14 is critical in cell cycle progression as its depletion results in the formation of multiple daughters per division round. When the parasite egresses from the host cell, glycolytic enzyme GAPDH1 translocates to the cortex. The functional role of GAPDH1 in the parasite and the mechanism of its cortical translocation are deciphered based on the 2.25Å resolution crystal structure of the GAPDH1 holoenzyme in a quaternary complex. These studies identified that GAPDH1’s enzymatic function is essential for intracellular replication but we confirmed the previous reports that glycolysis is not strictly essential in presence of excess L-glutamine. We identify, for the first time, S-loop phosphorylation as a novel, critical regulator of enzymatic activity that is consistent with the notion that the S-loop is critical for cofactor binding, allosteric activation and oligomerization. We show that neither enzymatic activity nor phosphorylation state correlate with the ability to translocate to the cortex. However, we demonstrate that association of GAPDH1 with the cortex is mediated by Cysteine 3 in the N-terminus, likely by palmitoylation. Overall, glycolysis and cortical translocation are functionally decoupled by post-translational modifications. Collectively, the discoveries made in this dissertation reveal unprecedented detail in mechanism and function of cortical protein translocation and thereby identifying new drug targets. === Thesis (PhD) — Boston College, 2017. === Submitted to: Boston College. Graduate School of Arts and Sciences. === Discipline: Biology. |
author |
Dubey, Rashmi |
author_facet |
Dubey, Rashmi |
author_sort |
Dubey, Rashmi |
title |
Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
title_short |
Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
title_full |
Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
title_fullStr |
Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
title_full_unstemmed |
Deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of Toxoplasma gondii: |
title_sort |
deciphering the mechanism and function of stage-specific protein association with the membrane cytoskeleton of toxoplasma gondii: |
publisher |
Boston College |
publishDate |
2017 |
url |
http://hdl.handle.net/2345/bc-ir:107315 |
work_keys_str_mv |
AT dubeyrashmi decipheringthemechanismandfunctionofstagespecificproteinassociationwiththemembranecytoskeletonoftoxoplasmagondii |
_version_ |
1719079669744009216 |