Aggregation of γ-crystallins associated with human cataracts via domain swapping at the C-terminal β-strands

This article contains supporting information online at www.pnas.org/lookup/suppl/ doi:10.1073/pnas.1019152108/-/DCSupplemental.

Bibliographic Details
Main Authors: Das, Payel (Author), Zhou, Ruhong (Author), King, Jonathan Alan (Contributor)
Other Authors: Massachusetts Institute of Technology. Department of Biology (Contributor)
Format: Article
Language:English
Published: Proceedings of the National Academy of Sciences (PNAS), 2012-02-08T20:36:49Z.
Subjects:
Online Access:Get fulltext
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100 1 0 |a Das, Payel  |e author 
100 1 0 |a Massachusetts Institute of Technology. Department of Biology  |e contributor 
100 1 0 |a King, Jonathan Alan  |e contributor 
100 1 0 |a King, Jonathan Alan  |e contributor 
700 1 0 |a Zhou, Ruhong  |e author 
700 1 0 |a King, Jonathan Alan  |e author 
245 0 0 |a Aggregation of γ-crystallins associated with human cataracts via domain swapping at the C-terminal β-strands 
260 |b Proceedings of the National Academy of Sciences (PNAS),   |c 2012-02-08T20:36:49Z. 
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520 |a This article contains supporting information online at www.pnas.org/lookup/suppl/ doi:10.1073/pnas.1019152108/-/DCSupplemental. 
520 |a The prevalent eye disease age-onset cataract is associated with aggregation of human γD-crystallins, one of the longest-lived proteins. Identification of the γ-crystallin precursors to aggregates is crucial for developing strategies to prevent and reverse cataract. Our microseconds of atomistic molecular dynamics simulations uncover the molecular structure of the experimentally detected aggregation-prone folding intermediate species of monomeric native γD-crystallin with a largely folded C-terminal domain and a mostly unfolded N-terminal domain. About 30 residues including a, b, and c strands from the Greek Key motif 4 of the C-terminal domain experience strong solvent exposure of hydrophobic residues as well as partial unstructuring upon N-terminal domain unfolding. Those strands comprise the domain-domain interface crucial for unusually high stability of γD-crystallin. We further simulate the intermolecular linkage of these monomeric aggregation precursors, which reveals domain-swapped dimeric structures. In the simulated dimeric structures, the N-terminal domain of one monomer is frequently found in contact with residues 135-164 encompassing the a, b, and c strands of the Greek Key motif 4 of the second molecule. The present results suggest that γD-crystallin may polymerize through successive domain swapping of those three C-terminal β-strands leading to age-onset cataract, as an evolutionary cost of its very high stability. Alanine substitutions of the hydrophobic residues in those aggregation-prone β-strands, such as L145 and M147, hinder domain swapping as a pathway toward dimerization. These findings thus provide critical molecular insights onto the initial stages of age-onset cataract, which is important for understanding protein aggregation diseases. 
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