Zebrafish promoter microarrays identify actively transcribed embryonic genes

We have designed a zebrafish genomic microarray to identify DNA-protein interactions in the proximal promoter regions of over 11,000 zebrafish genes. Using these microarrays, together with chromatin immunoprecipitation with an antibody directed against tri-methylated lysine 4 of Histone H3, we demon...

Full description

Bibliographic Details
Main Authors: Wardle, Fiona C (Author), Odom, Duncan (Author), Bell, George W. (Contributor), Wiellette, Elizabeth L (Author), Herbolsheimer, Elizabeth (Author), Smith, James C (Author), Yuan, Bingbing B. (Contributor), Sive, Hazel L. (Contributor), Danford, Timothy William (Contributor), Young, Richard A. (Contributor)
Other Authors: Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory (Contributor), Massachusetts Institute of Technology. Department of Biology (Contributor), Whitehead Institute for Biomedical Research (Contributor)
Format: Article
Language:English
Published: BioMed Central Ltd, 2010-10-05T20:08:23Z.
Subjects:
Online Access:Get fulltext
LEADER 02088 am a22003853u 4500
001 58880
042 |a dc 
100 1 0 |a Wardle, Fiona C  |e author 
100 1 0 |a Massachusetts Institute of Technology. Computer Science and Artificial Intelligence Laboratory  |e contributor 
100 1 0 |a Massachusetts Institute of Technology. Department of Biology  |e contributor 
100 1 0 |a Whitehead Institute for Biomedical Research  |e contributor 
100 1 0 |a Yuan, Bingbing B.  |e contributor 
100 1 0 |a Sive, Hazel L.  |e contributor 
100 1 0 |a Danford, Timothy William  |e contributor 
100 1 0 |a Young, Richard A.  |e contributor 
100 1 0 |a Bell, George W.  |e contributor 
700 1 0 |a Odom, Duncan  |e author 
700 1 0 |a Bell, George W.  |e author 
700 1 0 |a Wiellette, Elizabeth L  |e author 
700 1 0 |a Herbolsheimer, Elizabeth  |e author 
700 1 0 |a Smith, James C  |e author 
700 1 0 |a Yuan, Bingbing B.  |e author 
700 1 0 |a Sive, Hazel L.  |e author 
700 1 0 |a Danford, Timothy William  |e author 
700 1 0 |a Young, Richard A.  |e author 
245 0 0 |a Zebrafish promoter microarrays identify actively transcribed embryonic genes 
260 |b BioMed Central Ltd,   |c 2010-10-05T20:08:23Z. 
856 |z Get fulltext  |u http://hdl.handle.net/1721.1/58880 
520 |a We have designed a zebrafish genomic microarray to identify DNA-protein interactions in the proximal promoter regions of over 11,000 zebrafish genes. Using these microarrays, together with chromatin immunoprecipitation with an antibody directed against tri-methylated lysine 4 of Histone H3, we demonstrate the feasibility of this method in zebrafish. This approach will allow investigators to determine the genomic binding locations of DNA interacting proteins during development and expedite the assembly of the genetic networks that regulate embryogenesis. 
520 |a Wellcome Trust 
520 |a European Molecular Biology Organization 
520 |a National Institutes of Health (Grant HG002668) (Grant DK070813) (Grant 2RO1 HD33472) (Grant 5RO1 MH59942) 
546 |a en 
655 7 |a Article 
773 |t Genome Biology