Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)

Abstract Background Non-small cell lung carcinoma (NSCLC) is one of the most common human cancers, comprising approximately 80–85% of all lung carcinomas. An estimated incidence of NSCLC is approximately 2 million new cases per year worldwide. Results In recent decade, the treatment of NSCLC has mad...

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Main Authors: Ya-jun Zhou, Wei Zheng, Qing-hua Zeng, Yang Ye, Ce Wang, Cheng Fang, Chao-jun Liu, Li Niu, Li-ming Wu
Format: Article
Language:English
Published: BMC 2021-04-01
Series:Human Genomics
Subjects:
Online Access:https://doi.org/10.1186/s40246-021-00320-9
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spelling doaj-ffdcf3a89dce48c1bfeca55327f9928f2021-04-18T11:50:08ZengBMCHuman Genomics1479-73642021-04-0115111010.1186/s40246-021-00320-9Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)Ya-jun Zhou0Wei Zheng1Qing-hua Zeng2Yang Ye3Ce Wang4Cheng Fang5Chao-jun Liu6Li Niu7Li-ming Wu8Department of Thoracic Surgery, The First Affiliated Hospital of Nanchang UniversityDepartment of Oncology, PLA General HospitalDepartment of Respiratory Medicine, The First Affiliated Hospital of Nanchang UniversityDepartment of Cardiothoracic Surgery, Jingdezhen First People’s HospitalCheerLand Clinical Laboratory Co., Ltd.Department of Oncology, The 334 Affiliated Hospital of Nanchang UniversityCheerLand Clinical Laboratory Co., Ltd.CheerLand Clinical Laboratory Co., Ltd.Department of Radiation Oncology, The First Affiliated Hospital of Anhui Medical UniversityAbstract Background Non-small cell lung carcinoma (NSCLC) is one of the most common human cancers, comprising approximately 80–85% of all lung carcinomas. An estimated incidence of NSCLC is approximately 2 million new cases per year worldwide. Results In recent decade, the treatment of NSCLC has made breakthrough progress owing to a large number of targeted therapies which were approved for clinical use. Epidemiology, genetic susceptibility, and molecular profiles in patients are likely to play an important factor in response rates and survival benefits to these targeted treatments and thus warrant further investigation on ethnic differences in NSCLC. In this study, a total number of 1500 Chinese patient samples,1000 formalin fixed paraffin-embedded (FFPE) and 500 blood samples, from patients with NSCLC were analyzed by targeted sequencing to explore mutational landscape in ethnic groups associated with China. Conclusions Overall, the data presented here provide a comprehensive analysis of NSCLC mutational landscape in Chinese patients and findings are discussed in the context of similar studies on different ethnic groups.https://doi.org/10.1186/s40246-021-00320-9Targeted exome sequencingNon-small cell lung carcinomaChinese patientsCancerDisease
collection DOAJ
language English
format Article
sources DOAJ
author Ya-jun Zhou
Wei Zheng
Qing-hua Zeng
Yang Ye
Ce Wang
Cheng Fang
Chao-jun Liu
Li Niu
Li-ming Wu
spellingShingle Ya-jun Zhou
Wei Zheng
Qing-hua Zeng
Yang Ye
Ce Wang
Cheng Fang
Chao-jun Liu
Li Niu
Li-ming Wu
Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
Human Genomics
Targeted exome sequencing
Non-small cell lung carcinoma
Chinese patients
Cancer
Disease
author_facet Ya-jun Zhou
Wei Zheng
Qing-hua Zeng
Yang Ye
Ce Wang
Cheng Fang
Chao-jun Liu
Li Niu
Li-ming Wu
author_sort Ya-jun Zhou
title Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
title_short Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
title_full Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
title_fullStr Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
title_full_unstemmed Targeted exome sequencing identifies mutational landscape in a cohort of 1500 Chinese patients with non-small cell lung carcinoma (NSCLC)
title_sort targeted exome sequencing identifies mutational landscape in a cohort of 1500 chinese patients with non-small cell lung carcinoma (nsclc)
publisher BMC
series Human Genomics
issn 1479-7364
publishDate 2021-04-01
description Abstract Background Non-small cell lung carcinoma (NSCLC) is one of the most common human cancers, comprising approximately 80–85% of all lung carcinomas. An estimated incidence of NSCLC is approximately 2 million new cases per year worldwide. Results In recent decade, the treatment of NSCLC has made breakthrough progress owing to a large number of targeted therapies which were approved for clinical use. Epidemiology, genetic susceptibility, and molecular profiles in patients are likely to play an important factor in response rates and survival benefits to these targeted treatments and thus warrant further investigation on ethnic differences in NSCLC. In this study, a total number of 1500 Chinese patient samples,1000 formalin fixed paraffin-embedded (FFPE) and 500 blood samples, from patients with NSCLC were analyzed by targeted sequencing to explore mutational landscape in ethnic groups associated with China. Conclusions Overall, the data presented here provide a comprehensive analysis of NSCLC mutational landscape in Chinese patients and findings are discussed in the context of similar studies on different ethnic groups.
topic Targeted exome sequencing
Non-small cell lung carcinoma
Chinese patients
Cancer
Disease
url https://doi.org/10.1186/s40246-021-00320-9
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