Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes

East Asia is one of the plant diversity and endemism centers in the world, and the temporal and spatial patterns and processes of vascular plants attracted ecologists’ and biogeographers’ attention. However, the biogeographic patterns of endemic epiphytic plants in East Asia are still unclear. Here,...

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Main Authors: Jiahong Zhao, Peng Zhou, Xiaoqian Li, Liguo Zhang, Xiaohua Jin, Xiaoguo Xiang
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-07-01
Series:Frontiers in Ecology and Evolution
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fevo.2020.00245/full
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spelling doaj-ffac13a705174b75a6ae2129016d7aab2020-11-25T03:15:37ZengFrontiers Media S.A.Frontiers in Ecology and Evolution2296-701X2020-07-01810.3389/fevo.2020.00245532269Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast GenesJiahong Zhao0Peng Zhou1Xiaoqian Li2Xiaoqian Li3Liguo Zhang4Xiaohua Jin5Xiaoguo Xiang6Jiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Institute of Life Science and School of Life Sciences, Nanchang University, Nanchang, ChinaJiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Institute of Life Science and School of Life Sciences, Nanchang University, Nanchang, ChinaJiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Institute of Life Science and School of Life Sciences, Nanchang University, Nanchang, ChinaState Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, ChinaJiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Institute of Life Science and School of Life Sciences, Nanchang University, Nanchang, ChinaState Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing, ChinaJiangxi Province Key Laboratory of Watershed Ecosystem Change and Biodiversity, Institute of Life Science and School of Life Sciences, Nanchang University, Nanchang, ChinaEast Asia is one of the plant diversity and endemism centers in the world, and the temporal and spatial patterns and processes of vascular plants attracted ecologists’ and biogeographers’ attention. However, the biogeographic patterns of endemic epiphytic plants in East Asia are still unclear. Here, we investigated the historical biogeography of an East Asian endemic epiphytic genus Holcoglossum Schltr. (Orchidaceae). Using DNA sequences of eleven chloroplast genes and one nuclear gene, we reconstructed a robust phylogenetic framework for Holcoglossum and used a relaxed-clock method to estimate divergent times for the genus. We inferred the ancestral range of lineages under the statistical dispersal-extinction cladogenesis (S-DEC) and statistical dispersal-vicariance analysis (S-DIVA), respectively. Biogeographical analysis suggested that the most recent common ancestor of Holcoglossum occurred in the Palaeotropical region in the late Miocene (6.33 Ma). Four dispersal events were inferred to explain the Holcoglossum expansion to Sino-Himalayan, Sino-Japanese, and Taiwan regions from the latest Miocene to Quaternary. The episodes of these events were associated with intensification of East Asian monsoon around 3.6–2.6 Ma and global cooling since the latest Pliocene. The disjunct distribution between mainland China and Taiwan was attributed by the sea-level fluctuations and climate changes during the late Pliocene. This study shed light on the biogeographic processes of endemic epiphytic plants in East Asia.https://www.frontiersin.org/article/10.3389/fevo.2020.00245/fullbiogeographyEast AsiaHolcoglossummolecular datingphylogeny
collection DOAJ
language English
format Article
sources DOAJ
author Jiahong Zhao
Peng Zhou
Xiaoqian Li
Xiaoqian Li
Liguo Zhang
Xiaohua Jin
Xiaoguo Xiang
spellingShingle Jiahong Zhao
Peng Zhou
Xiaoqian Li
Xiaoqian Li
Liguo Zhang
Xiaohua Jin
Xiaoguo Xiang
Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
Frontiers in Ecology and Evolution
biogeography
East Asia
Holcoglossum
molecular dating
phylogeny
author_facet Jiahong Zhao
Peng Zhou
Xiaoqian Li
Xiaoqian Li
Liguo Zhang
Xiaohua Jin
Xiaoguo Xiang
author_sort Jiahong Zhao
title Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
title_short Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
title_full Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
title_fullStr Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
title_full_unstemmed Temporal and Spatial Pattern of Holcoglossum Schltr. (Orchidaceae), an East Asian Endemic Genus, Based on Nuclear and Chloroplast Genes
title_sort temporal and spatial pattern of holcoglossum schltr. (orchidaceae), an east asian endemic genus, based on nuclear and chloroplast genes
publisher Frontiers Media S.A.
series Frontiers in Ecology and Evolution
issn 2296-701X
publishDate 2020-07-01
description East Asia is one of the plant diversity and endemism centers in the world, and the temporal and spatial patterns and processes of vascular plants attracted ecologists’ and biogeographers’ attention. However, the biogeographic patterns of endemic epiphytic plants in East Asia are still unclear. Here, we investigated the historical biogeography of an East Asian endemic epiphytic genus Holcoglossum Schltr. (Orchidaceae). Using DNA sequences of eleven chloroplast genes and one nuclear gene, we reconstructed a robust phylogenetic framework for Holcoglossum and used a relaxed-clock method to estimate divergent times for the genus. We inferred the ancestral range of lineages under the statistical dispersal-extinction cladogenesis (S-DEC) and statistical dispersal-vicariance analysis (S-DIVA), respectively. Biogeographical analysis suggested that the most recent common ancestor of Holcoglossum occurred in the Palaeotropical region in the late Miocene (6.33 Ma). Four dispersal events were inferred to explain the Holcoglossum expansion to Sino-Himalayan, Sino-Japanese, and Taiwan regions from the latest Miocene to Quaternary. The episodes of these events were associated with intensification of East Asian monsoon around 3.6–2.6 Ma and global cooling since the latest Pliocene. The disjunct distribution between mainland China and Taiwan was attributed by the sea-level fluctuations and climate changes during the late Pliocene. This study shed light on the biogeographic processes of endemic epiphytic plants in East Asia.
topic biogeography
East Asia
Holcoglossum
molecular dating
phylogeny
url https://www.frontiersin.org/article/10.3389/fevo.2020.00245/full
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