Signaling by Steroid Hormones in the 3D Nuclear Space

Initial studies showed that ligand-activated hormone receptors act by binding to the proximal promoters of individual target genes. Genome-wide studies have now revealed that regulation of transcription by steroid hormones mainly depends on binding of the receptors to distal regulatory elements. Tho...

Full description

Bibliographic Details
Main Authors: François Le Dily, Miguel Beato
Format: Article
Language:English
Published: MDPI AG 2018-01-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/19/2/306
id doaj-ff969866c1b44724867d0a0d95e12045
record_format Article
spelling doaj-ff969866c1b44724867d0a0d95e120452020-11-24T21:06:19ZengMDPI AGInternational Journal of Molecular Sciences1422-00672018-01-0119230610.3390/ijms19020306ijms19020306Signaling by Steroid Hormones in the 3D Nuclear SpaceFrançois Le Dily0Miguel Beato1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Doctor Aiguader 88, 08003 Barcelona, SpainGene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Doctor Aiguader 88, 08003 Barcelona, SpainInitial studies showed that ligand-activated hormone receptors act by binding to the proximal promoters of individual target genes. Genome-wide studies have now revealed that regulation of transcription by steroid hormones mainly depends on binding of the receptors to distal regulatory elements. Those distal elements, either enhancers or silencers, act on the regulation of target genes by chromatin looping to the gene promoters. In the nucleus, this level of chromatin folding is integrated within dynamic higher orders of genome structures, which are organized in a non-random fashion. Terminally differentiated cells exhibit a tissue-specific three-dimensional (3D) organization of the genome that favors or restrains the activity of transcription factors and modulates the function of steroid hormone receptors, which are transiently activated upon hormone exposure. Conversely, integration of the hormones signal may require modifications of the 3D organization to allow appropriate transcriptional outcomes. In this review, we summarize the main levels of organization of the genome, review how they can modulate the response to steroids in a cell specific manner and discuss the role of receptors in shaping and rewiring the structure in response to hormone. Taking into account the dynamics of 3D genome organization will contribute to a better understanding of the pleiotropic effects of steroid hormones in normal and cancer cells.http://www.mdpi.com/1422-0067/19/2/306chromatin conformationestrogen receptorsteroid receptorstopological domainstranscription regulation
collection DOAJ
language English
format Article
sources DOAJ
author François Le Dily
Miguel Beato
spellingShingle François Le Dily
Miguel Beato
Signaling by Steroid Hormones in the 3D Nuclear Space
International Journal of Molecular Sciences
chromatin conformation
estrogen receptor
steroid receptors
topological domains
transcription regulation
author_facet François Le Dily
Miguel Beato
author_sort François Le Dily
title Signaling by Steroid Hormones in the 3D Nuclear Space
title_short Signaling by Steroid Hormones in the 3D Nuclear Space
title_full Signaling by Steroid Hormones in the 3D Nuclear Space
title_fullStr Signaling by Steroid Hormones in the 3D Nuclear Space
title_full_unstemmed Signaling by Steroid Hormones in the 3D Nuclear Space
title_sort signaling by steroid hormones in the 3d nuclear space
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2018-01-01
description Initial studies showed that ligand-activated hormone receptors act by binding to the proximal promoters of individual target genes. Genome-wide studies have now revealed that regulation of transcription by steroid hormones mainly depends on binding of the receptors to distal regulatory elements. Those distal elements, either enhancers or silencers, act on the regulation of target genes by chromatin looping to the gene promoters. In the nucleus, this level of chromatin folding is integrated within dynamic higher orders of genome structures, which are organized in a non-random fashion. Terminally differentiated cells exhibit a tissue-specific three-dimensional (3D) organization of the genome that favors or restrains the activity of transcription factors and modulates the function of steroid hormone receptors, which are transiently activated upon hormone exposure. Conversely, integration of the hormones signal may require modifications of the 3D organization to allow appropriate transcriptional outcomes. In this review, we summarize the main levels of organization of the genome, review how they can modulate the response to steroids in a cell specific manner and discuss the role of receptors in shaping and rewiring the structure in response to hormone. Taking into account the dynamics of 3D genome organization will contribute to a better understanding of the pleiotropic effects of steroid hormones in normal and cancer cells.
topic chromatin conformation
estrogen receptor
steroid receptors
topological domains
transcription regulation
url http://www.mdpi.com/1422-0067/19/2/306
work_keys_str_mv AT francoisledily signalingbysteroidhormonesinthe3dnuclearspace
AT miguelbeato signalingbysteroidhormonesinthe3dnuclearspace
_version_ 1716765901654589440